RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 IFI35P80217 286 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-206ENST00000523469 C1orf141Q5JVX7 400 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 GRTP1Q5TC63 336 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 ZNF530Q6P9A1 599 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-206ENST00000523469 TEX38Q6PEX7 206 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 CEACAM20Q6UY09 585 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 PLD3Q8IV08 490 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 CPSF7Q8N684 471 aaKnown RBP5.45□□□□□ -1.54
CPNE3-206ENST00000523469 OR10V1Q8NGI7 309 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 OR2AJ1Q8NGZ0 328 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 GRAPLQ8TC17 118 aaPredicted RBP5.45□□□□□ -1.54
CPNE3-206ENST00000523469 ERO1AQ96HE7 468 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 SGK494Q96LW2 274 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 PRO3102Q9H379 93 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 BICC1Q9H694 974 aaKnown RBP5.45□□□□□ -1.54
CPNE3-206ENST00000523469 ACKR4Q9NPB9 350 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.45□□□□□ -1.54
CPNE3-206ENST00000523469 BRCA2P51587 3418 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 HTTP42858 3142 aa5.45□□□□□ -1.54
CPNE3-206ENST00000523469 UBR2Q8IWV8 1755 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 ROCK2O75116 1388 aaKnown RBP5.44□□□□□ -1.54
CPNE3-206ENST00000523469 SMIM1B2RUZ4 78 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 XRCC3O43542 346 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 TSHBP01222 138 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 IGHV4-38-2P0DP08 117 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 ACP2P11117 423 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 BDNFP23560 247 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 LIG4P49917 911 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 BECN1Q14457 450 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 ZC2HC1CQ53FD0 456 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-206ENST00000523469 BMP2KLQ5H9B9 411 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 DGLUCYQ7Z3D6 616 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 PRPF39Q86UA1 669 aaKnown RBP5.44□□□□□ -1.54
CPNE3-206ENST00000523469 TMEM173Q86WV6 379 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-206ENST00000523469 AVL9Q8NBF6 648 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 OR10S1Q8NGN2 331 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 CD99L2Q8TCZ2 262 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 ZNF524Q96C55 264 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 SLC47A1Q96FL8 570 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 MS4A10Q96PG2 267 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 ABHD1Q96SE0 405 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 PSD2Q9BQI7 771 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 FNDC11Q9BVV2 318 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 APOL6Q9BWW8 343 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 TMX4Q9H1E5 349 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-206ENST00000523469 DPAGT1Q9H3H5 408 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 GDE1Q9NZC3 331 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 COQ3Q9NZJ6 369 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 ZNF624Q9P2J8 865 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-206ENST00000523469 NME7Q9Y5B8 376 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 MAGED1Q9Y5V3 778 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-206ENST00000523469 WDR81Q562E7 1941 aa5.44□□□□□ -1.54
CPNE3-206ENST00000523469 ZNF646O15015 1829 aaPredicted RBP5.44□□□□□ -1.54
CPNE3-206ENST00000523469 DDX60Q8IY21 1712 aaKnown RBP5.43□□□□□ -1.54
CPNE3-206ENST00000523469 ALPK3Q96L96 1907 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 SNED1Q8TER0 1413 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 A0A1W2PRB8 838 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 PMS2P5A8MQ11 134 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 TCERG1O14776 1098 aaKnown RBP5.43□□□□□ -1.54
CPNE3-206ENST00000523469 IPO8O15397 1037 aaKnown RBP5.43□□□□□ -1.54
CPNE3-206ENST00000523469 PCDH7O60245 1069 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 CIDEAO60543 219 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 EPHA2P29317 976 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 TNIP1Q15025 636 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 CBWD6Q4V339 395 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 ZNF628Q5EBL2 1059 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 MDH1BQ5I0G3 518 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 CBWD3Q5JTY5 395 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 GFI1BQ5VTD9 330 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 GPR139Q6DWJ6 353 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 TMEM211Q6ICI0 200 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 RBMS3Q6XE24 437 aaKnown RBP5.43□□□□□ -1.54
CPNE3-206ENST00000523469 TRPT1Q86TN4 253 aaKnown RBP5.43□□□□□ -1.54
CPNE3-206ENST00000523469 EXD1Q8NHP7 514 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 FCAMRQ8WWV6 532 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 NR4A3Q92570 626 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 PTERQ96BW5 349 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 FBXO17Q96EF6 278 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 BTBD10Q9BSF8 475 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 KLHL4Q9C0H6 718 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 SLC35C2Q9NQQ7 365 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 ECHDC1Q9NTX5 307 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 ADPRHL2Q9NX46 363 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 CRNNQ9UBG3 495 aaPredicted RBP5.43□□□□□ -1.54
CPNE3-206ENST00000523469 SLC7A7Q9UM01 511 aa5.43□□□□□ -1.54
CPNE3-206ENST00000523469 RAB3GAP2Q9H2M9 1393 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 hCG_1809904A0A1W2PP81 198 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 A0A1W2PPE2 198 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 A0A1W2PR64 198 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 ANKUB1A6NFN9 424 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 DUXAA6NLW8 204 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 OR6C76A6NM76 312 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 BLOC1S5-TXNDC5H3BN57 136 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 LIFP15018 202 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 SNAPC1Q16533 368 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 C16orf54Q6UWD8 224 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 RNF128Q8TEB7 428 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 ZFAND2BQ8WV99 257 aa5.42□□□□□ -1.54
CPNE3-206ENST00000523469 SPACA9Q96E40 222 aaPredicted RBP5.42□□□□□ -1.54
CPNE3-206ENST00000523469 DGAT2Q96PD7 388 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms