RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SUV39H2Q9H5I1 410 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 TMEM27Q9HBJ8 222 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 C11orf16Q9NQ32 467 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 MAN2B2Q9Y2E5 1009 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 SOCS2O14508 198 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 PCDH7O60245 1069 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 KHDRBS3O75525 346 aaKnown RBP13.5□□□□□ -0.25
SYNPO-205ENST00000522122 NPPAP01160 153 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 DNTTP04053 509 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 G6PDP11413 515 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 MYF6P23409 242 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 ALDH3A2P51648 485 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 AP1S2P56377 157 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 DSC3Q14574 896 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 KRT77Q7Z794 578 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 RBM12BQ8IXT5 1001 aaKnown RBP13.5□□□□□ -0.25
SYNPO-205ENST00000522122 OR10G2Q8NGC3 310 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 MOCOSQ96EN8 888 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF778Q96MU6 729 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 ABCB8Q9NUT2 735 aa13.5□□□□□ -0.25
SYNPO-205ENST00000522122 H0YAE9 185 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 FKTNO75072 461 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 PGRP06401 933 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 OMPP47874 163 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 ENTPD1P49961 510 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 PITX1P78337 314 aaPredicted RBP13.49□□□□□ -0.25
SYNPO-205ENST00000522122 TXNL4AP83876 142 aaKnown RBP13.49□□□□□ -0.25
SYNPO-205ENST00000522122 RAB39AQ14964 217 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 RTL4Q6ZR62 310 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 MAVSQ7Z434 540 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 ADGRG2Q8IZP9 1017 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 CNPPD1Q9BV87 410 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 AKAP7Q9P0M2 348 aaPredicted RBP13.49□□□□□ -0.25
SYNPO-205ENST00000522122 GIMAP2Q9UG22 337 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 A0A0J9YVX5 310 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 BTN3A3O00478 584 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 ENGP17813 658 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 TIGD6Q17RP2 521 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 MS4A13Q5J8X5 152 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 OR4F3Q6IEY1 312 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 USP43Q70EL4 1123 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 KCNA7Q96RP8 456 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 RANBP9Q96S59 729 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 POLR2J3Q9H1A7 115 aaKnown RBP13.49□□□□□ -0.25
SYNPO-205ENST00000522122 MTMR10Q9NXD2 777 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 NKIRAS2Q9NYR9 191 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 A0A1W2PRB8 838 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 SLC25A12O75746 678 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 EPHX1P07099 455 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 BMP2P12643 396 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 TMBIM6P55061 237 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 PRR5P85299 388 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 CHRNA6Q15825 494 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 CLDN19Q8N6F1 224 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 FLCNQ8NFG4 579 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 NLGN2Q8NFZ4 835 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 SLC29A3Q9BZD2 475 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 BRINP2Q9C0B6 783 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 TRIT1Q9H3H1 467 aaKnown RBP13.49□□□□□ -0.25
SYNPO-205ENST00000522122 CALML5Q9NZT1 146 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 STX16O14662 325 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 CNTN5O94779 1100 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 NFATC1O95644 943 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 EMX2Q04743 252 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 IQCCQ4KMZ1 466 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 ATP13A5Q4VNC0 1218 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 LRRC73Q5JTD7 316 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 ZNF248Q8NDW4 579 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 PIGXQ8TBF5 258 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 KBTBD7Q8WVZ9 684 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 ZBED6CLQ96FA7 236 aaPredicted RBP13.49□□□□□ -0.25
SYNPO-205ENST00000522122 POLR2J2Q9GZM3 115 aaKnown RBP13.49□□□□□ -0.25
SYNPO-205ENST00000522122 TVP23BQ9NYZ1 205 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 FLRT1Q9NZU1 646 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 MTRRQ9UBK8 725 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 Q9Y3F1 56 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 CEPT1Q9Y6K0 416 aa13.49□□□□□ -0.25
SYNPO-205ENST00000522122 LOC730098B7Z3J9 87 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 AP1G1O43747 822 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 IQCF3P0C7M6 154 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TPTEP56180 551 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 CDKL1Q00532 357 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 MVKQ03426 396 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TMCO6Q96DC7 493 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 PRSS51A0A1B0GVH4 220 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TLL1O43897 1013 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 KLHL18O94889 574 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 ABHD18Q0P651 414 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 CXorf57Q6NSI4 855 aaKnown RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TNFAIP8L2Q6P589 184 aaPredicted RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 FAM180AQ6UWF9 173 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 DNAJB7Q7Z6W7 309 aaPredicted RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 RBM23Q86U06 439 aaKnown RBP13.48□□□□□ -0.25
SYNPO-205ENST00000522122 OAFQ86UD1 273 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 MINDY1Q8N5J2 469 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TRPV1Q8NER1 839 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 EFCAB11Q9BUY7 163 aa13.48□□□□□ -0.25
SYNPO-205ENST00000522122 TMEM165Q9HC07 324 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms