RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 SYNCRIPO60506 623 aaKnown RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 PRAMEF11O60813 436 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 CTSVO60911 334 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 FRAT2O75474 233 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 CREG1O75629 220 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 PDE9AO76083 593 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 IGHV4-39P01824 125 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 NR2F1P10589 423 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 MARK3P27448 753 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 HOXD10P28358 340 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 GABRA5P31644 462 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 MMP15P51511 669 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 MBTD1Q05BQ5 628 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 GAGE5Q13069 117 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 GAGE6Q13070 117 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 PRKAA1Q13131 559 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 BAATQ14032 418 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 WDR43Q15061 677 aaKnown RBP eCLIP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 RBBP5Q15291 538 aaKnown RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 GARNL3Q5VVW2 1013 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 FAM109BQ6ICB4 259 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 KLC3Q6P597 504 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 CEP57Q86XR8 500 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 CIARTQ8N365 385 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 CCDC89Q8N998 374 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 SYT2Q8N9I0 419 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 AVL9Q8NBF6 648 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 DBF4BQ8NFT6 615 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 CTCFLQ8NI51 663 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 LPGAT1Q92604 370 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 PTERQ96BW5 349 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 PGLYRP2Q96PD5 576 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 OR6C1Q96RD1 312 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 MRPL1Q9BYD6 325 aaKnown RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 HHATLQ9HCP6 504 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 SLC38A7Q9NVC3 462 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 CWC25Q9NXE8 425 aaPredicted RBP3.43□□□□□ -1.86
HDAC2-208ENST00000520746 NPAP1Q9NZP6 1156 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 JRKLQ9Y4A0 524 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 MYO3BQ8WXR4 1341 aa3.43□□□□□ -1.86
HDAC2-208ENST00000520746 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 CCL15-CCL14A0A0B4J2E2 113 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 TEX13DA0A0J9YY54 714 aaPredicted RBP3.42□□□□□ -1.86
HDAC2-208ENST00000520746 PRSS51A0A1B0GVH4 220 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 hCG_1809904A0A1W2PP81 198 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 A0A1W2PPE2 198 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 A0A1W2PPI3 338 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 A0A1W2PR64 198 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 TCP10L2B9ZVM9 353 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 P2RY10O00398 339 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 CFC1BP0CG36 223 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 CFC1P0CG37 223 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 CKMT2P17540 419 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 CBLP22681 906 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 LIG4P49917 911 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 KIR2DS3Q14952 304 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 CCL15Q16663 113 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 TEX38Q6PEX7 206 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 FIGLAQ6QHK4 219 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 DENND5BQ6ZUT9 1274 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 SLC26A9Q7LBE3 791 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 ADGRA1Q86SQ6 560 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 ADIPOR2Q86V24 386 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 CCDC191Q8NCU4 936 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 RAET1EQ8TD07 263 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 LRRC8CQ8TDW0 803 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 TAS1R2Q8TE23 839 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 DAZLQ92904 295 aaKnown RBP3.42□□□□□ -1.86
HDAC2-208ENST00000520746 MTERF3Q96E29 417 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 ALG14Q96F25 216 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 SCRN2Q96FV2 425 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 ST6GAL2Q96JF0 529 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 C17orf77Q96MU5 243 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 NEK1Q96PY6 1258 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 SLF1Q9BQI6 1058 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 C16orf70Q9BSU1 422 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 MOV10L1Q9BXT6 1211 aaKnown RBP3.42□□□□□ -1.86
HDAC2-208ENST00000520746 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 ANKRD2Q9GZV1 360 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 COA1Q9GZY4 146 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 FAM118AQ9NWS6 357 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 RHCGQ9UBD6 479 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 MORF4L1Q9UBU8 362 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.42□□□□□ -1.86
HDAC2-208ENST00000520746 SPIN1Q9Y657 262 aaPredicted RBP3.42□□□□□ -1.86
HDAC2-208ENST00000520746 FAM169AQ9Y6X4 670 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 RIC1Q4ADV7 1423 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 SCN7AQ01118 1682 aa3.42□□□□□ -1.86
HDAC2-208ENST00000520746 GREB1LQ9C091 1923 aaPredicted RBP3.42□□□□□ -1.86
HDAC2-208ENST00000520746 LTBP1Q14766 1721 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 ADAMTSL1Q8N6G6 1762 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 ELOVL7A1L3X0 281 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 FAM172BPA6NC97 362 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 XRCC3O43542 346 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 ZG16O60844 167 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 PCCAP05165 728 aaPredicted RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 H1F0P07305 194 aaKnown RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 ABCB1P08183 1280 aaPredicted RBP3.41□□□□□ -1.86
HDAC2-208ENST00000520746 NR1D1P20393 614 aa3.41□□□□□ -1.86
HDAC2-208ENST00000520746 DNASE1P24855 282 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms