RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 C1QTNF7Q9BXJ2 289 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 SPRTNQ9H040 489 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-208ENST00000520228 AAMDCQ9H7C9 122 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 POPDC2Q9HBU9 364 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 IFT80Q9P2H3 777 aaPredicted RBP6.95□□□□□ -1.3
SDCBP-208ENST00000520228 DEC1Q9P2X7 70 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 HEY2Q9UBP5 337 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 HSF4Q9ULV5 492 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 NAALADL1Q9UQQ1 740 aa6.95□□□□□ -1.3
SDCBP-208ENST00000520228 FAM170AA1A519 330 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 NEDD8-MDP1E9PL57 170 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 HSF2BPO75031 334 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 TULP3O75386 442 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 GRAP2O75791 330 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 APODP05090 189 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 SP9P0CG40 484 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 PRF1P14222 555 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 FERP16591 822 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 CHRNB2P17787 502 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 PRKCHP24723 683 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 EIF2DP41214 584 aaKnown RBP6.94□□□□□ -1.3
SDCBP-208ENST00000520228 CCR3P51677 355 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 RBMS2Q15434 407 aaKnown RBP6.94□□□□□ -1.3
SDCBP-208ENST00000520228 DCAF6Q58WW2 860 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 ENTPD8Q5MY95 495 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 SYPL2Q5VXT5 272 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 NUGGCQ68CJ6 796 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 AAGABQ6PD74 315 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 FAM183BPQ6ZVS7 135 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 SLC26A9Q7LBE3 791 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-208ENST00000520228 TAC4Q86UU9 113 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 UNC45BQ8IWX7 931 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 MAML2Q8IZL2 1156 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-208ENST00000520228 DEFB106AQ8N104 65 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 ESX1Q8N693 406 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 FAM122AQ96E09 287 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 PIWIL1Q96J94 861 aaKnown RBP6.94□□□□□ -1.3
SDCBP-208ENST00000520228 SERPINB11Q96P15 392 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 XPO6Q96QU8 1125 aaKnown RBP6.94□□□□□ -1.3
SDCBP-208ENST00000520228 TRMOQ9BU70 441 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 NPLQ9BXD5 320 aaPredicted RBP6.94□□□□□ -1.3
SDCBP-208ENST00000520228 DNAJC17Q9NVM6 304 aaKnown RBP6.94□□□□□ -1.3
SDCBP-208ENST00000520228 MYO6Q9UM54 1294 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 SUFUQ9UMX1 484 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 CLDN16Q9Y5I7 305 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 F5P12259 2224 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 CACNA1HO95180 2353 aa6.94□□□□□ -1.3
SDCBP-208ENST00000520228 MYO10Q9HD67 2058 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 LY6G6EA0A0G2JKS1 128 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 A6NNC1 897 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 GOLGA8SH3BPF8 625 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 K7EQS6 105 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 CACNG3O60359 315 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 TRUB2O95900 331 aaKnown RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 PENKP01210 267 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 IGLV3-27P01718 113 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 APOEP02649 317 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 TPM3P06753 285 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 FGF2P09038 288 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 SLC2A3P11169 496 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 TNFRSF4P43489 277 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 NSFP46459 744 aaKnown RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 GABRB2P47870 512 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 KDSRQ06136 332 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 ETFDHQ16134 617 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 ASIC2Q16515 512 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 RPE65Q16518 533 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 ZNF528Q3MIS6 628 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 MPPE1Q53F39 396 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 C2CD6Q53TS8 623 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 C6orf10Q5SRN2 563 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 SFMBT2Q5VUG0 894 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 TSSK4Q6SA08 328 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 MMS22LQ6ZRQ5 1243 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 IRF2BP2Q7Z5L9 587 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 CCDC25Q86WR0 208 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 FAM217AQ8IXS0 508 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 CPXM2Q8N436 756 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 NANOGP1Q8N7R0 232 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 ZNF397Q8NF99 534 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 RPLP0P6Q8NHW5 317 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 MPLKIPQ8TAP9 179 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 DENND1AQ8TEH3 1009 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 DDI1Q8WTU0 396 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 FAR1Q8WVX9 515 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 AZIN2Q96A70 460 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 TMA16Q96EY4 203 aaKnown RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 PCDHB18PQ96TA0 734 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 AGPAT1Q99943 283 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 DDX50Q9BQ39 737 aaKnown RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 NUP58Q9BVL2 599 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 EDEM3Q9BZQ6 932 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 ACTR5Q9H9F9 607 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 PRMT8Q9NR22 394 aaPredicted RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 SEPT11Q9NVA2 429 aaKnown RBP6.93□□□□□ -1.3
SDCBP-208ENST00000520228 DDIT4Q9NX09 232 aa6.93□□□□□ -1.3
SDCBP-208ENST00000520228 PLK2Q9NYY3 685 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms