RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 BMP7P18075 431 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 MAGEA10P43363 369 aaPredicted RBP11.42□□□□□ -0.58
SYNPO-204ENST00000519664 OR4D2P58180 307 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 C2orf27AQ580R0 203 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 ERICH5Q6P6B1 374 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 GDPD4Q6W3E5 623 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 ZFP28Q8NHY6 868 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 ZNF671Q8TAW3 534 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 TAMM41Q96BW9 452 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 WDR83Q9BRX9 315 aaKnown RBP11.42□□□□□ -0.58
SYNPO-204ENST00000519664 SPRTNQ9H040 489 aaPredicted RBP11.42□□□□□ -0.58
SYNPO-204ENST00000519664 RNF186Q9NXI6 227 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 ZIM2Q9NZV7 527 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 FZD4Q9ULV1 537 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 BOLA2-SMG1P6H3BVE0 249 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 IL12AP29459 219 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 SRSF11Q05519 484 aaKnown RBP11.42□□□□□ -0.58
SYNPO-204ENST00000519664 DSC3Q14574 896 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 PTPRRQ15256 657 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 LY6G5CQ5SRR4 150 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 CES5AQ6NT32 575 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 ZNF438Q7Z4V0 828 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 FAM129CQ86XR2 697 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 PAWRQ96IZ0 340 aaKnown RBP11.42□□□□□ -0.58
SYNPO-204ENST00000519664 SPATA2Q9UM82 520 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 MAPRE3Q9UPY8 281 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 NOTOA8MTQ0 251 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 MANBAO00462 879 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 FAM189A1O60320 539 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 ERN1O75460 977 aaKnown RBP11.42□□□□□ -0.58
SYNPO-204ENST00000519664 CREG1O75629 220 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 PRNPP04156 253 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 KLK1P06870 262 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 PTPN2P17706 415 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 STX4Q12846 297 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 MYLK3Q32MK0 819 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 PIANPQ8IYJ0 282 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 ADAMTS15Q8TE58 950 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 C12orf43Q96C57 262 aaKnown RBP11.42□□□□□ -0.58
SYNPO-204ENST00000519664 OR10H1Q9Y4A9 318 aa11.42□□□□□ -0.58
SYNPO-204ENST00000519664 SNPHO15079 494 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 STC2O76061 302 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 FGBP02675 491 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 HNF1BP35680 557 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 SEC13P55735 322 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 ABRAXAS2Q15018 415 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 NPTX1Q15818 432 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 PKDCCQ504Y2 493 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 PYDC2Q56P42 97 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 FAM46CQ5VWP2 391 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 DPY19L3Q6ZPD9 716 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 TPRG1Q6ZUI0 275 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 C1QTNF7Q9BXJ2 289 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 TOR3AQ9H497 397 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 ZNF840PA6NDX5 716 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 FADS2P1A8MWK0 482 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 TBX1O43435 398 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 GMFGO60234 142 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 TFPTP0C1Z6 253 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 PRPS1L1P21108 318 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 PTNP21246 168 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 RPL4P36578 427 aaKnown RBP11.41□□□□□ -0.58
SYNPO-204ENST00000519664 SLC26A3P40879 764 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 OR1E2P47887 323 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 NFATC2Q13469 925 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 ZNF423Q2M1K9 1284 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 TNFAIP8L3Q5GJ75 292 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 OR52E8Q6IFG1 317 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 DENND5AQ6IQ26 1287 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 CDC73Q6P1J9 531 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 LUZP2Q86TE4 346 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 KCT2Q8NC54 265 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 ZCCHC10Q8TBK6 192 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 C2orf15Q8WU43 125 aaKnown RBP11.41□□□□□ -0.58
SYNPO-204ENST00000519664 SLC29A1Q99808 456 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 TRMT61BQ9BVS5 477 aaKnown RBP11.41□□□□□ -0.58
SYNPO-204ENST00000519664 MIR1-1HGQ9H1L0 117 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 ZNF451Q9Y4E5 1061 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 ZNF780BQ9Y6R6 833 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 CPSF4LA6NMK7 179 aaKnown RBP11.41□□□□□ -0.58
SYNPO-204ENST00000519664 CAPN14A8MX76 684 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 AP2A2O94973 939 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 SNX4O95219 450 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 CAPN3P20807 821 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 ENTPD1P49961 510 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 PLEKHG6Q3KR16 790 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 RNASE12Q5GAN4 147 aaKnown RBP11.41□□□□□ -0.58
SYNPO-204ENST00000519664 BHLHB9Q6PI77 547 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 ARHGAP12Q8IWW6 846 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 NXPE1Q8N323 547 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 Q96MT0 163 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 SLC38A2Q96QD8 506 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 RHCGQ9UBD6 479 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 DHRS7Q9Y394 339 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 INSL5Q9Y5Q6 135 aa11.41□□□□□ -0.58
SYNPO-204ENST00000519664 NUP214P35658 2090 aaPredicted RBP11.41□□□□□ -0.58
SYNPO-204ENST00000519664 A0A1W2PRB8 838 aa11.4□□□□□ -0.58
SYNPO-204ENST00000519664 WNT9AO14904 365 aa11.4□□□□□ -0.58
SYNPO-204ENST00000519664 GADD45GO95257 159 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms