RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TRIM54Q9BYV2 358 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SLC32A1Q9H598 525 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 ZBTB26Q9HCK0 441 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SLC6A20Q9NP91 592 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 CD274Q9NZQ7 290 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 SEMA5BQ9P283 1151 aa9.54□□□□□ -0.88
CLN8-202ENST00000517514 IGHV5-51A0A0C4DH38 117 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 IGHV5-10-1A0A0J9YXX1 117 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 A0A1B0GTL3 188 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 A0A1W2PNU3 283 aaPredicted RBP9.53□□□□□ -0.88
CLN8-202ENST00000517514 STX16-NPEPL1H3BU86 382 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 E2F3O00716 465 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 STX16O14662 325 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 HCRTR1O43613 425 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 DUX1O43812 170 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 CPNE6O95741 557 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 RPS17P08708 135 aaKnown RBP9.53□□□□□ -0.88
CLN8-202ENST00000517514 HIST1H2AGP0C0S8 130 aaPredicted RBP9.53□□□□□ -0.88
CLN8-202ENST00000517514 PVRP15151 417 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 HIST1H2ADP20671 130 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 ALDH3A1P30838 453 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 HSD17B2P37059 387 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 ALDH18A1P54886 795 aaKnown RBP9.53□□□□□ -0.88
CLN8-202ENST00000517514 SIM1P81133 766 aaPredicted RBP9.53□□□□□ -0.88
CLN8-202ENST00000517514 BIRC2Q13490 618 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 KIR2DS3Q14952 304 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 PCBP2Q15366 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLN8-202ENST00000517514 CCDC153Q494R4 210 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 UNC50Q53HI1 259 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 CCDC157Q569K6 752 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 KIAA1614Q5VZ46 1190 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 FCRL6Q6DN72 434 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 TMEM71Q6P5X7 295 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 SPESP1Q6UW49 350 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 LCTLQ6UWM7 567 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 FAM92BQ6ZTR7 304 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 ARHGAP22Q7Z5H3 698 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 THOC6Q86W42 341 aaKnown RBP9.53□□□□□ -0.88
CLN8-202ENST00000517514 OOSP2Q86WS3 158 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 MARCH9Q86YJ5 346 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 C10orf107Q8IVU9 208 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 SYTL1Q8IYJ3 562 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 FBXO39Q8N4B4 442 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 OR6Y1Q8NGX8 325 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 PHF21BQ96EK2 531 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 HIST1H2AHQ96KK5 128 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 NSUN5Q96P11 429 aaKnown RBP9.53□□□□□ -0.88
CLN8-202ENST00000517514 TGM7Q96PF1 710 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 TMEM237Q96Q45 408 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 MAP3K3Q99759 626 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 HIST1H2AJQ99878 128 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 EGFL8Q99944 293 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 RTKNQ9BST9 563 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 H2AFJQ9BTM1 129 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 MECRQ9BV79 373 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 C1QTNF3Q9BXJ4 246 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 CD244Q9BZW8 370 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 SPNS1Q9H2V7 528 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 EPB41L1Q9H4G0 881 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 CUEDC1Q9NWM3 386 aaPredicted RBP9.53□□□□□ -0.88
CLN8-202ENST00000517514 COPG2Q9UBF2 871 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 TAC3Q9UHF0 121 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 LNPEPQ9UIQ6 1025 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 SLC22A14Q9Y267 594 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 KLHL20Q9Y2M5 609 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 KLK4Q9Y5K2 254 aa9.53□□□□□ -0.88
CLN8-202ENST00000517514 TMEM120BA0PK00 339 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 GSAPA4D1B5 854 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PMS2P1A4D2B8 440 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 GOLGA6L10A6NI86 522 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 SYCE1LA8MT33 242 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 C2orf74A8MZ97 194 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ISM1B1AKI9 464 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 HMGB1P1B2RPK0 211 aaPredicted RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 PPP6CO00743 305 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 WDR47O94967 919 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 THRAP10827 490 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 GFAPP14136 432 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 CPA3P15088 417 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ST6GAL1P15907 406 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 CD22P20273 847 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ATP5F1P24539 256 aaPredicted RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 EEF1DP29692 281 aaKnown RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 ARRB2P32121 409 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 GRIA3P42263 894 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 CCR10P46092 362 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 GABRA4P48169 554 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 HNMTP50135 292 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 SLC18A1P54219 525 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PRKAA2P54646 552 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 E2F1Q01094 437 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PRDX1Q06830 199 aaKnown RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 E2F2Q14209 437 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 C16orf72Q14CZ0 275 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 CLPPQ16740 277 aaPredicted RBP9.52□□□□□ -0.89
CLN8-202ENST00000517514 SLC5A12Q1EHB4 618 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ZNF678Q5SXM1 525 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 PRAMEF13Q5VWM6 474 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ICE2Q659A1 982 aa9.52□□□□□ -0.89
CLN8-202ENST00000517514 ZNF425Q6IV72 752 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms