RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 HDHD2Q9H0R4 259 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 TMEM245Q9H330 911 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 CPNE5Q9HCH3 593 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 PCDHB8Q9UN66 801 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 A0A0U1RQS6 177 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 DNAJA1P31689 397 aaKnown RBP13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 ERVPABLB-1P60509 514 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 OLR1P78380 273 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 IRF8Q02556 426 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 SMU1Q2TAY7 513 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 SPATS1Q496A3 300 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 CEP78Q5JTW2 689 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 VTCN1Q7Z7D3 282 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 DEPDC4Q8N2C3 294 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 THUMPD1Q9NXG2 353 aaKnown RBP13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 NUDT4Q9NZJ9 180 aa13.28□□□□□ -0.28
SH3TC1-225ENST00000515682 UPK3BL1B0FP48 263 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 UPK3BL2E5RIL1 263 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 AREL1O15033 823 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 GJB3O75712 270 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 CPNE6O95741 557 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 PFKLP17858 780 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 RPL17P18621 184 aaKnown RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 HNF4AP41235 474 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 MLLT10P55197 1068 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 CTU2Q2VPK5 515 aaKnown RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 SPDYE7PQ495Y7 208 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 OTUD1Q5VV17 481 aaPredicted RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 KIAA1614Q5VZ46 1190 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 LETMD1Q6P1Q0 360 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 SYCE2Q6PIF2 218 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 SERINC5Q86VE9 423 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 STK40Q8N2I9 435 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 TCAIMQ8N3R3 496 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 PHF10Q8WUB8 498 aaKnown RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 PYCR2Q96C36 320 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 POLR3BQ9NW08 1133 aaPredicted RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 UTS2RQ9UKP6 389 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 IFT52Q9Y366 437 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 OR6C70A6NIJ9 312 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 SOBPA7XYQ1 873 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 AP2A2O94973 939 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 FGBP02675 491 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 ITGB1P05556 798 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 CDKN1CP49918 316 aaPredicted RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 RPP38P78345 283 aaKnown RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 TSTQ16762 297 aaKnown RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 PYCR3Q53H96 274 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 CASP12Q6UXS9 341 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 FAM83FQ8NEG4 500 aaPredicted RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 RHEBL1Q8TAI7 183 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 NETO1Q8TDF5 533 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 FUBP1Q96AE4 644 aaKnown RBP13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 CLN6Q9NWW5 311 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 DNMT3LQ9UJW3 386 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 RAI2Q9Y5P3 530 aa13.27□□□□□ -0.28
SH3TC1-225ENST00000515682 ADH1AP07327 375 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 RAB25P57735 213 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 UGT3A2Q3SY77 523 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 FBXL22Q6P050 247 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 TPGS1Q6ZTW0 290 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 PAQR9Q6ZVX9 377 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 CDH24Q86UP0 819 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 RHOXF1Q8NHV9 184 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 IPCEF1Q8WWN9 437 aaPredicted RBP13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 CSF3RQ99062 836 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 AMBRA1Q9C0C7 1298 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 SLC13A4Q9UKG4 626 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 PCTPQ9UKL6 214 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 SNX6Q9UNH7 406 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 A0A1B0GTL3 188 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 A0A1W2PQ72 361 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 STK16O75716 305 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 PAPSS2O95340 614 aaPredicted RBP13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 HNRNPFP52597 415 aaKnown RBP13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 TUBA1BP68363 451 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 SEMG2Q02383 582 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 KRT33BQ14525 404 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 FAM214AQ32MH5 1076 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 TJAP1Q5JTD0 557 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 RETSATQ6NUM9 610 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 TUBA1AQ71U36 451 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 RRM2BQ7LG56 351 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 CYP4Z1Q86W10 505 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 ZMIZ2Q8NF64 920 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 TMCO6Q96DC7 493 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 DUS3LQ96G46 650 aaKnown RBP13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 PAWRQ96IZ0 340 aaKnown RBP13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 IL4I1Q96RQ9 567 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 PAAF1Q9BRP4 392 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 CRISPLD1Q9H336 500 aa13.27□□□□□ -0.29
SH3TC1-225ENST00000515682 ISPDA4D126 451 aa13.26□□□□□ -0.29
SH3TC1-225ENST00000515682 FPR1P21462 350 aa13.26□□□□□ -0.29
SH3TC1-225ENST00000515682 GP2P55259 537 aaKnown RBP13.26□□□□□ -0.29
SH3TC1-225ENST00000515682 YBX1P67809 324 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms