RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 MPP3Q13368 585 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 FAM214AQ32MH5 1076 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 WASHC2DQ5SRD0 308 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 PRMT9Q6P2P2 845 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 FIGLAQ6QHK4 219 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 NAPRTQ6XQN6 538 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 SNX20Q7Z614 316 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 EID3Q8N140 333 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 BEST3Q8N1M1 668 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 GHDCQ8N2G8 530 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 LINC01555Q8NAE3 123 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 TFB1MQ8WVM0 346 aaKnown RBP9.98□□□□□ -0.81
CLDND1-231ENST00000515620 NINJ1Q92982 152 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 FRMD6Q96NE9 622 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 ZNF285Q96NJ3 590 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 FCRL5Q96RD9 977 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 APOL2Q9BQE5 337 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 TRIM51Q9BSJ1 452 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 YIPF2Q9BWQ6 316 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 HSD3B7Q9H2F3 369 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 INTS7Q9NVH2 962 aaKnown RBP9.98□□□□□ -0.81
CLDND1-231ENST00000515620 CTTNBP2NLQ9P2B4 639 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 STOX2Q9P2F5 926 aaPredicted RBP9.98□□□□□ -0.81
CLDND1-231ENST00000515620 CIDEBQ9UHD4 219 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 TEKT2Q9UIF3 430 aa9.98□□□□□ -0.81
CLDND1-231ENST00000515620 NSD1Q96L73 2696 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 IGLV3-12A0A075B6K2 115 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 A0A087X0T9 212 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 A8MUI8 341 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 PRRG2O14669 202 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 LIN7AO14910 233 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ASNA1O43681 348 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 CTSVO60911 334 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 KRT1P04264 644 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 HEXBP07686 556 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 FAM228BP0C875 321 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 PRSS56P0CW18 603 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 FOSL1P15407 271 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ZFXP17010 805 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ACRV1P26436 265 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 EEF1DP29692 281 aaKnown RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ST13P50502 369 aaKnown RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ZNF140P52738 457 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 AP2B1P63010 937 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 TFF3Q07654 80 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 DSG2Q14126 1118 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 PCOLCEQ15113 449 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 SYTL3Q4VX76 610 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 CES4AQ5XG92 561 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 FCRLBQ6BAA4 426 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 FRMPD2BQ6IN97 320 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 CEP128Q6ZU80 1094 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 SERPINA9Q86WD7 417 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 SIAH3Q8IW03 269 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 DMRTC2Q8IXT2 367 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ZNF567Q8N184 647 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ELMO1Q92556 727 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 IL17FQ96PD4 163 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 SIGLEC12Q96PQ1 595 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 MDFIQ99750 246 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 SMR3AQ99954 134 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 UCK2Q9BZX2 261 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ZNF700Q9H0M5 742 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 LUC7LQ9NQ29 371 aaKnown RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ANKRD10Q9NXR5 420 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 SAE1Q9UBE0 346 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-231ENST00000515620 TRPC4Q9UBN4 977 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 KCNN3Q9UGI6 736 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 RSPH14Q9UHP6 348 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 FAM169AQ9Y6X4 670 aa9.97□□□□□ -0.81
CLDND1-231ENST00000515620 ASPDHA6ND91 283 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 RCCD1A6NED2 376 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 C5orf60A6NFR6 353 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 RASGRF2O14827 1237 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 CRTAMO95727 393 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 EIF2S1P05198 315 aaKnown RBP9.96□□□□□ -0.82
CLDND1-231ENST00000515620 GSTM1P09488 218 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 PECAM1P16284 738 aaPredicted RBP9.96□□□□□ -0.82
CLDND1-231ENST00000515620 MSX1P28360 303 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 MC4RP32245 332 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 GSTM4Q03013 218 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 TUBA3CQ13748 450 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 OR1C1Q15619 314 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 SF1Q15637 639 aaKnown RBP9.96□□□□□ -0.82
CLDND1-231ENST00000515620 SKOR2Q2VWA4 1001 aaPredicted RBP9.96□□□□□ -0.82
CLDND1-231ENST00000515620 GPR33Q49SQ1 333 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 TUBA3EQ6PEY2 450 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 TAS2R42Q7RTR8 314 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 PID1Q7Z2X4 250 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 FGD2Q7Z6J4 655 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 CHERPQ8IWX8 916 aaKnown RBP9.96□□□□□ -0.82
CLDND1-231ENST00000515620 MARVELD2Q8N4S9 558 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 MDS2Q8NDY4 140 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 SLC22A18Q96BI1 424 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 C10orf90Q96M02 699 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 LIME1Q9H400 295 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 ENAMQ9NRM1 1142 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 C14orf105Q9NVL8 296 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 DNAJB12Q9NXW2 375 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms