RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 ZSCAN9O15535 394 aaPredicted RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 URI1O94763 535 aaPredicted RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 ATXN8OSP0DMR3 200 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 ERGP11308 486 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 AGXTP21549 392 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 PTPN4P29074 926 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 CMPK1P30085 196 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 RPA3P35244 121 aaPredicted RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 HSD17B2P37059 387 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 RGS4P49798 205 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 PNLIPRP1P54315 467 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 TIAL1Q01085 375 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDR1-277ENST00000515219 CKAP4Q07065 602 aaKnown RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 MGAT5Q09328 741 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 C19orf57Q0VDD7 668 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 PDAP1Q13442 181 aaKnown RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 FRG1Q14331 258 aaKnown RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 ARHGAP19Q14CB8 494 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 ZC3H12BQ5HYM0 836 aaKnown RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 HECTD2Q5U5R9 776 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 DUPD1Q68J44 220 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 LCN10Q6JVE6 187 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 LRRC8EQ6NSJ5 796 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 TLDC1Q6P9B6 456 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 PAQR3Q6TCH7 311 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 FBXO15Q8NCQ5 510 aaPredicted RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 OR2L3Q8NG85 312 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 EEF1AKMT1Q8WVE0 214 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 RAB17Q9H0T7 212 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 CDC23Q9UJX2 597 aa16.71■□□□□ 0.27
DDR1-277ENST00000515219 CORO1CQ9ULV4 474 aaPredicted RBP16.71■□□□□ 0.27
DDR1-277ENST00000515219 TARM1B6A8C7 271 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 SLC16A8O95907 504 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 FURINP09958 794 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 COL9A2Q14055 689 aaPredicted RBP16.7■□□□□ 0.26
DDR1-277ENST00000515219 C1orf189Q5VU69 101 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 RHBDD2Q6NTF9 364 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 CAPN12Q6ZSI9 719 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 ZNF572Q7Z3I7 529 aaPredicted RBP16.7■□□□□ 0.26
DDR1-277ENST00000515219 PALM2Q8IXS6 379 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 MYO1HQ8N1T3 1032 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 ZNF843Q8N446 348 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 PPFIBP2Q8ND30 876 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 PYROXD1Q8WU10 500 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 ZNF592Q92610 1267 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 NDC1Q9BTX1 674 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 SAYSD1Q9NPB0 183 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 TXLNGQ9NUQ3 528 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 ABCF3Q9NUQ8 709 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 GRHL1Q9NZI5 618 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 SRPK3Q9UPE1 567 aa16.7■□□□□ 0.26
DDR1-277ENST00000515219 C9J4A7 227 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 RAB40ALP0C0E4 278 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 SFTPCP11686 197 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 POLE2P56282 527 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 CBLBQ13191 982 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 FAM45BPQ6NSW5 357 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 FAM198BQ6UWH4 519 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 STRA8Q7Z7C7 330 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 SYVN1Q86TM6 617 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 ENDOVQ8N8Q3 282 aaKnown RBP16.69■□□□□ 0.26
DDR1-277ENST00000515219 FAM45AQ8TCE6 357 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 ZNF480Q8WV37 535 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 APOBEC4Q8WW27 367 aaKnown RBP16.69■□□□□ 0.26
DDR1-277ENST00000515219 SEC14L1Q92503 715 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 LINGO1Q96FE5 620 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 DPH2Q9BQC3 489 aaPredicted RBP16.69■□□□□ 0.26
DDR1-277ENST00000515219 SELENOSQ9BQE4 189 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 DPH7Q9BTV6 452 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 NLNQ9BYT8 704 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 MRPS30Q9NP92 439 aaKnown RBP16.69■□□□□ 0.26
DDR1-277ENST00000515219 MOCS1Q9NZB8 636 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 DHCR7Q9UBM7 475 aaKnown RBP16.69■□□□□ 0.26
DDR1-277ENST00000515219 TAC3Q9UHF0 121 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 POLHQ9Y253 713 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 VWA7Q9Y334 891 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 ANKRD12Q6UB98 2062 aa16.69■□□□□ 0.26
DDR1-277ENST00000515219 FER1L5A0AVI2 2057 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 E7ENX8 843 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 EIF3HO15372 352 aaKnown RBP eCLIP16.68■□□□□ 0.265e-6■■■□□ 14.9
DDR1-277ENST00000515219 CTSVO60911 334 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 RECKO95980 971 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 C8GP07360 202 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 SAT1P21673 171 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 FDXRP22570 491 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 PGGT1BP53609 377 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 PLTPP55058 493 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 IL2P60568 153 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 YBX1P67809 324 aaKnown RBP16.68■□□□□ 0.26
DDR1-277ENST00000515219 TAP2Q03519 686 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 NAA25Q14CX7 972 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 THEMIS2Q5TEJ8 643 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 ZNF385CQ66K41 422 aaPredicted RBP16.68■□□□□ 0.26
DDR1-277ENST00000515219 PROKR1Q8TCW9 393 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 MCOLN3Q8TDD5 553 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 OLFM1Q99784 485 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 FAM117AQ9C073 453 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 ADNPQ9H2P0 1102 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 SLC6A20Q9NP91 592 aa16.68■□□□□ 0.26
DDR1-277ENST00000515219 STARD5Q9NSY2 213 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms