RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 MORF4L2Q15014 288 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 CPZQ66K79 652 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 PDIK1LQ8N165 341 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 ADAMTS17Q8TE56 1095 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 SELENOSQ9BQE4 189 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 AARSD1Q9BTE6 412 aaKnown RBP23.51■■□□□ 1.35
SNF8-213ENST00000514929 ACAT2Q9BWD1 397 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 TRIM55Q9BYV6 548 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 TRIM4Q9C037 500 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 ACSS2Q9NR19 701 aa23.51■■□□□ 1.35
SNF8-213ENST00000514929 A0A1W2PPV9 198 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 CCDC188H7C350 402 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 MYO1CO00159 1063 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 MPC1LP0DKB6 136 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 ERGP11308 486 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 ALAS2P22557 587 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 CMPK1P30085 196 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 ARSFP54793 590 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 TSTA3Q13630 321 aaPredicted RBP23.5■■□□□ 1.35
SNF8-213ENST00000514929 SLC9A5Q14940 896 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 ARHGAP19Q14CB8 494 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 NKAIN1Q4KMZ8 207 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 TCTE1Q5JU00 501 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 TCTN3Q6NUS6 607 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 TTLL10Q6ZVT0 673 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 C2CD4AQ8NCU7 369 aaPredicted RBP23.5■■□□□ 1.35
SNF8-213ENST00000514929 SMPDL3AQ92484 453 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 PKP4Q99569 1192 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 TRIM51Q9BSJ1 452 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 ING2Q9H160 280 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 ANAPC2Q9UJX6 822 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 BSNQ9UPA5 3926 aa23.5■■□□□ 1.35
SNF8-213ENST00000514929 ZNF839A8K0R7 811 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 SMAPO00193 183 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 TTI1O43156 1089 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 SYF2O95926 243 aaKnown RBP23.49■■□□□ 1.35
SNF8-213ENST00000514929 CD63P08962 238 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 NR1D1P20393 614 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 RPA3P35244 121 aaPredicted RBP23.49■■□□□ 1.35
SNF8-213ENST00000514929 HSD17B2P37059 387 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 GRM7Q14831 915 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 NAA25Q14CX7 972 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 SUSD1Q6UWL2 747 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 RAB43Q86YS6 212 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 IGDCC3Q8IVU1 814 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 SPNS2Q8IVW8 549 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 CPNE9Q8IYJ1 553 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 TTC29Q8NA56 475 aaPredicted RBP23.49■■□□□ 1.35
SNF8-213ENST00000514929 CD200R1Q8TD46 325 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 RNF14Q9UBS8 474 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 TRMT6Q9UJA5 497 aaKnown RBP23.49■■□□□ 1.35
SNF8-213ENST00000514929 PTRH2Q9Y3E5 179 aaKnown RBP23.49■■□□□ 1.35
SNF8-213ENST00000514929 KLK4Q9Y5K2 254 aa23.49■■□□□ 1.35
SNF8-213ENST00000514929 ZBTB14O43829 449 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 CTSVO60911 334 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 KLF7O75840 302 aaPredicted RBP23.48■■□□□ 1.35
SNF8-213ENST00000514929 MCM3P25205 808 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 OTX2P32243 289 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 FOLR3P41439 243 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 CCL11P51671 97 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 PNLIPRP1P54315 467 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 HP1BP3Q5SSJ5 553 aaPredicted RBP23.48■■□□□ 1.35
SNF8-213ENST00000514929 UGT3A1Q6NUS8 523 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 FBXO15Q8NCQ5 510 aaPredicted RBP23.48■■□□□ 1.35
SNF8-213ENST00000514929 ASB11Q8WXH4 323 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 CERS2Q96G23 380 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 CFAP36Q96G28 342 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 PWWP2AQ96N64 755 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 NDNQ99608 321 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 DPH7Q9BTV6 452 aa23.48■■□□□ 1.35
SNF8-213ENST00000514929 PPANQ9NQ55 473 aaKnown RBP23.48■■□□□ 1.35
SNF8-213ENST00000514929 A0A0J9YVX5 310 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 A0A1B0GX78 115 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 K7EM74 188 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 SRPX2O60687 465 aaPredicted RBP23.47■■□□□ 1.35
SNF8-213ENST00000514929 SLC16A8O95907 504 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 ELK3P41970 407 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 CARSP49589 748 aaKnown RBP23.47■■□□□ 1.35
SNF8-213ENST00000514929 ITGA8P53708 1063 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 VSX2P58304 361 aaPredicted RBP23.47■■□□□ 1.35
SNF8-213ENST00000514929 YOD1Q5VVQ6 348 aaPredicted RBP23.47■■□□□ 1.35
SNF8-213ENST00000514929 HIBCHQ6NVY1 386 aaPredicted RBP23.47■■□□□ 1.35
SNF8-213ENST00000514929 CYHR1Q6ZMK1 362 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 ASB18Q6ZVZ8 466 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 PIWIL4Q7Z3Z4 852 aaKnown RBP23.47■■□□□ 1.35
SNF8-213ENST00000514929 SNF8Q96H20 258 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 TRIM31Q9BZY9 425 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 MRPS30Q9NP92 439 aaKnown RBP23.47■■□□□ 1.35
SNF8-213ENST00000514929 CUTCQ9NTM9 273 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 TAS2R13Q9NYV9 303 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 ZC3H7BQ9UGR2 993 aaKnown RBP23.47■■□□□ 1.35
SNF8-213ENST00000514929 CHMP2BQ9UQN3 213 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 SEC16AO15027 2179 aa23.47■■□□□ 1.35
SNF8-213ENST00000514929 FER1L5A0AVI2 2057 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 GFYI3L273 518 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 EIF3FO00303 357 aaPredicted RBP23.46■■□□□ 1.35
SNF8-213ENST00000514929 DSCR3O14972 297 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 GCGRP47871 477 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 ARL4CP56559 192 aa23.46■■□□□ 1.35
SNF8-213ENST00000514929 YBX1P67809 324 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms