RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 C21orf59P57076 290 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 EMX2Q04743 252 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 KLF10Q13118 480 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 EIF2B5Q13144 721 aaKnown RBP15.49■□□□□ 0.07
NUP54-214ENST00000514307 DOC2AQ14183 400 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 GRB7Q14451 532 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 SQLEQ14534 574 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 KIR2DS5Q14953 304 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 ELOCQ15369 112 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 MAPRE2Q15555 327 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 TEAD4Q15561 434 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 TPRG1LQ5T0D9 272 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 ATG9BQ674R7 924 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 OGFOD2Q6N063 350 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 IYDQ6PHW0 289 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 SLC30A9Q6PML9 568 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 NXPE4Q6UWF7 544 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 SLCO4C1Q6ZQN7 724 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 LONP2Q86WA8 852 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 LRRC56Q8IYG6 542 aaPredicted RBP15.49■□□□□ 0.07
NUP54-214ENST00000514307 PHACTR4Q8IZ21 702 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 FAM9CQ8IZT9 166 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 AVL9Q8NBF6 648 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 OR2L8Q8NGY9 312 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 RP9Q8TA86 221 aaKnown RBP15.49■□□□□ 0.07
NUP54-214ENST00000514307 SELENOMQ8WWX9 145 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 WDR34Q96EX3 536 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 C3orf30Q96M34 536 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 HSPA12BQ96MM6 686 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 TM9SF3Q9HD45 589 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.49■□□□□ 0.07
NUP54-214ENST00000514307 ARMCX1Q9P291 453 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 ADGRE2Q9UHX3 823 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 G3BP2Q9UN86 482 aaKnown RBP15.49■□□□□ 0.07
NUP54-214ENST00000514307 SLC12A4Q9UP95 1085 aa15.49■□□□□ 0.07
NUP54-214ENST00000514307 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 PSMD12O00232 456 aaPredicted RBP15.48■□□□□ 0.07
NUP54-214ENST00000514307 FFAR3O14843 346 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 GPR42O15529 346 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 HSD3B1P14060 373 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 GNSP15586 552 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 JUNDP17535 347 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 HRH2P25021 359 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 HSD3B2P26439 372 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 AK4P27144 223 aaPredicted RBP15.48■□□□□ 0.07
NUP54-214ENST00000514307 SHMT2P34897 504 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 TBPL1P62380 186 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 PHEXP78562 749 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 ABATP80404 500 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 STX5Q13190 355 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 UBAP2LQ14157 1087 aaKnown RBP15.48■□□□□ 0.07
NUP54-214ENST00000514307 ABRAXAS2Q15018 415 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 SGO1Q5FBB7 561 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 XKR7Q5GH72 579 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 PRAMEF14Q5SWL7 426 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 PRAMEF13Q5VWM6 474 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 FRG2Q64ET8 278 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 GRHL2Q6ISB3 625 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 MED27Q6P2C8 311 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 C17orf64Q86WR6 236 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 TRIM48Q8IWZ4 208 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 RBM12BQ8IXT5 1001 aaKnown RBP15.48■□□□□ 0.07
NUP54-214ENST00000514307 TMEFF1Q8IYR6 380 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 SLC22A18ASQ8N1D0 253 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 KRT78Q8N1N4 520 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 PPFIBP2Q8ND30 876 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 SLC5A11Q8WWX8 675 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 USP7Q93009 1102 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 SLC22A18Q96BI1 424 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 KLHL29Q96CT2 875 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 CATSPER2Q96P56 530 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 FRG2BQ96QU4 278 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 OR4K3Q96R72 315 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 PITHD1Q9GZP4 211 aaPredicted RBP15.48■□□□□ 0.07
NUP54-214ENST00000514307 PRM3Q9NNZ6 103 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 ARL8BQ9NVJ2 186 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 SPASTQ9UBP0 616 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 CIDEBQ9UHD4 219 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 EIF3LQ9Y262 564 aaKnown RBP15.48■□□□□ 0.07
NUP54-214ENST00000514307 PCDHB11Q9Y5F2 797 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 LRRK1Q38SD2 2015 aa15.48■□□□□ 0.07
NUP54-214ENST00000514307 CFAP73A6NFT4 308 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 TMEM221A6NGB7 291 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 M0R296 226 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 VILLO15195 856 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 BCAT2O15382 392 aaPredicted RBP15.47■□□□□ 0.07
NUP54-214ENST00000514307 CCNDBP1O95273 360 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 VIPP01282 170 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 CSF2P04141 144 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 T-ENOLP0DO92 83 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 PTPN4P29074 926 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 FNTBP49356 437 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 ACADVLP49748 655 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 AFF3P51826 1226 aaKnown RBP15.47■□□□□ 0.07
NUP54-214ENST00000514307 ERVK-8P63133 956 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 ACTN3Q08043 901 aaPredicted RBP15.47■□□□□ 0.07
NUP54-214ENST00000514307 CYLC2Q14093 348 aaPredicted RBP15.47■□□□□ 0.07
NUP54-214ENST00000514307 E2F2Q14209 437 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 HERC3Q15034 1050 aa15.47■□□□□ 0.07
NUP54-214ENST00000514307 AP5B1Q2VPB7 878 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms