RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 DGKQP52824 942 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 RHDQ02161 417 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 PON2Q15165 354 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 DLEU7Q6UYE1 221 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 DHFR2Q86XF0 187 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 LRRC56Q8IYG6 542 aaPredicted RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 SYTL1Q8IYJ3 562 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 ZUFSPQ96AP4 578 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 WDR34Q96EX3 536 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 VCX3BQ9H321 246 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 SPATA6Q9NWH7 488 aaPredicted RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 SLAMF8Q9P0V8 285 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 GMPR2Q9P2T1 348 aaKnown RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 SLC23A2Q9UGH3 650 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 DLGAP4Q9Y2H0 992 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 PRKAB1Q9Y478 270 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 KCNE2Q9Y6J6 123 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 KMOO15229 486 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 KLF8O95600 359 aaPredicted RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 PAK4O96013 591 aaPredicted RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 AMD1P17707 334 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 POU3F3P20264 500 aaPredicted RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 DRD1P21728 446 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 PNLIPRP1P54315 467 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 ADPRHP54922 357 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 CLDN8P56748 225 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 EEFSECP57772 596 aaKnown RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 METRNLQ641Q3 311 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 NANOGP8Q6NSW7 305 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 SLCO4C1Q6ZQN7 724 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 HID1Q8IV36 788 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 DNAJB14Q8TBM8 379 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 SLC13A3Q8WWT9 602 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 NEIL2Q969S2 332 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 APIPQ96GX9 242 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 METTL2AQ96IZ6 378 aaKnown RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 MUC13Q9H3R2 512 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 C8orf33Q9H7E9 229 aaPredicted RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 NANOGQ9H9S0 305 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 BRF2Q9HAW0 419 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 PHPT1Q9NRX4 125 aaPredicted RBP14.48□□□□□ -0.09
VCAN-211ENST00000513984 CD207Q9UJ71 328 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 RIMS3Q9UJD0 308 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 SCML1Q9UN30 329 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 PCDHGA11Q9Y5H2 935 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 PIAS3Q9Y6X2 628 aa14.48□□□□□ -0.09
VCAN-211ENST00000513984 UNC80Q8N2C7 3258 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 DNAJA2O60884 412 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 STAMBPO95630 424 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 RPSAP08865 295 aaKnown RBP14.47□□□□□ -0.09
VCAN-211ENST00000513984 MYCLP1P12525 358 aaPredicted RBP14.47□□□□□ -0.09
VCAN-211ENST00000513984 NPPBP16860 134 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 SDC1P18827 310 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 CLNS1AP54105 237 aaKnown RBP14.47□□□□□ -0.09
VCAN-211ENST00000513984 TAP2Q03519 686 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 SGCGQ13326 291 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 PWP1Q13610 501 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 ADGRE1Q14246 886 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 FAM174BQ3ZCQ3 159 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 RABL3Q5HYI8 236 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 OGFRL1Q5TC84 451 aaPredicted RBP14.47□□□□□ -0.09
VCAN-211ENST00000513984 IRAK1BP1Q5VVH5 260 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 LCN8Q6JVE9 175 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 PTRH1Q86Y79 214 aaKnown RBP14.47□□□□□ -0.09
VCAN-211ENST00000513984 DCUN1D3Q8IWE4 304 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
VCAN-211ENST00000513984 OR14C36Q8NHC7 312 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 GANCQ8TET4 914 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 NUDT8Q8WV74 236 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 SLC6A17Q9H1V8 727 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 ALG2Q9H553 416 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 PREBQ9HCU5 417 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 ASF1AQ9Y294 204 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 NEUROG3Q9Y4Z2 214 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 OR1A2Q9Y585 309 aa14.47□□□□□ -0.09
VCAN-211ENST00000513984 A0A1W2PQU0 124 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 PEX1O43933 1283 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 RNGTTO60942 597 aaKnown RBP14.46□□□□□ -0.09
VCAN-211ENST00000513984 PGRP06401 933 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 ATP6V1B2P21281 511 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 KELP23276 732 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 PEX2P28328 305 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 GSK3BP49841 420 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 MRPS21P82921 87 aaKnown RBP14.46□□□□□ -0.09
VCAN-211ENST00000513984 DMPKQ09013 629 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 TRIP10Q15642 601 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 FXNQ16595 210 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 SPANXN4Q5MJ08 99 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 IZUMO2Q6UXV1 221 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 HORMAD1Q86X24 394 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 RNF175Q8N4F7 328 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 KRTCAP2Q8N6L1 136 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 OR2T34Q8NGX1 318 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 GTF2H4Q92759 462 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 DNASE1L2Q92874 299 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 KLK6Q92876 244 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 RAD51AP1Q96B01 352 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 HHIPQ96QV1 700 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 CGREF1Q99674 301 aa14.46□□□□□ -0.09
VCAN-211ENST00000513984 ECSITQ9BQ95 431 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms