RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 BEST3Q8N1M1 668 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 GHDCQ8N2G8 530 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 LINC01555Q8NAE3 123 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 TFB1MQ8WVM0 346 aaKnown RBP9.98□□□□□ -0.81
CLDND1-227ENST00000513452 NINJ1Q92982 152 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 FRMD6Q96NE9 622 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 ZNF285Q96NJ3 590 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 FCRL5Q96RD9 977 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 APOL2Q9BQE5 337 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 TRIM51Q9BSJ1 452 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 YIPF2Q9BWQ6 316 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 HSD3B7Q9H2F3 369 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 INTS7Q9NVH2 962 aaKnown RBP9.98□□□□□ -0.81
CLDND1-227ENST00000513452 CTTNBP2NLQ9P2B4 639 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 STOX2Q9P2F5 926 aaPredicted RBP9.98□□□□□ -0.81
CLDND1-227ENST00000513452 CIDEBQ9UHD4 219 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 TEKT2Q9UIF3 430 aa9.98□□□□□ -0.81
CLDND1-227ENST00000513452 NSD1Q96L73 2696 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 IGLV3-12A0A075B6K2 115 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 A0A087X0T9 212 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 A8MUI8 341 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 PRRG2O14669 202 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 LIN7AO14910 233 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ASNA1O43681 348 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 CTSVO60911 334 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 KRT1P04264 644 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 HEXBP07686 556 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 FAM228BP0C875 321 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 PRSS56P0CW18 603 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 FOSL1P15407 271 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ZFXP17010 805 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ACRV1P26436 265 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 EEF1DP29692 281 aaKnown RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ST13P50502 369 aaKnown RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ZNF140P52738 457 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 AP2B1P63010 937 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 TFF3Q07654 80 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 DSG2Q14126 1118 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 PCOLCEQ15113 449 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 NFKBIBQ15653 356 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 SYTL3Q4VX76 610 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 CES4AQ5XG92 561 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 FCRLBQ6BAA4 426 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 FRMPD2BQ6IN97 320 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 CEP128Q6ZU80 1094 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 SERPINA9Q86WD7 417 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 SIAH3Q8IW03 269 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 DMRTC2Q8IXT2 367 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ZNF567Q8N184 647 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ELMO1Q92556 727 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 IL17FQ96PD4 163 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 SIGLEC12Q96PQ1 595 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 MDFIQ99750 246 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 SMR3AQ99954 134 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 UCK2Q9BZX2 261 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ZNF700Q9H0M5 742 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 LUC7LQ9NQ29 371 aaKnown RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ANKRD10Q9NXR5 420 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 SAE1Q9UBE0 346 aaPredicted RBP9.97□□□□□ -0.81
CLDND1-227ENST00000513452 TRPC4Q9UBN4 977 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 KCNN3Q9UGI6 736 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 RSPH14Q9UHP6 348 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 FAM169AQ9Y6X4 670 aa9.97□□□□□ -0.81
CLDND1-227ENST00000513452 ASPDHA6ND91 283 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 RCCD1A6NED2 376 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 C5orf60A6NFR6 353 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 RASGRF2O14827 1237 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 CRTAMO95727 393 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 EIF2S1P05198 315 aaKnown RBP9.96□□□□□ -0.82
CLDND1-227ENST00000513452 GSTM1P09488 218 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 PECAM1P16284 738 aaPredicted RBP9.96□□□□□ -0.82
CLDND1-227ENST00000513452 MSX1P28360 303 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 MC4RP32245 332 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 GSTM4Q03013 218 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 TUBA3CQ13748 450 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 OR1C1Q15619 314 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 SF1Q15637 639 aaKnown RBP9.96□□□□□ -0.82
CLDND1-227ENST00000513452 SKOR2Q2VWA4 1001 aaPredicted RBP9.96□□□□□ -0.82
CLDND1-227ENST00000513452 GPR33Q49SQ1 333 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 TUBA3EQ6PEY2 450 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 TAS2R42Q7RTR8 314 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 PID1Q7Z2X4 250 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 FGD2Q7Z6J4 655 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 CHERPQ8IWX8 916 aaKnown RBP9.96□□□□□ -0.82
CLDND1-227ENST00000513452 MARVELD2Q8N4S9 558 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 MDS2Q8NDY4 140 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 SLC22A18Q96BI1 424 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 C10orf90Q96M02 699 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 LIME1Q9H400 295 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 ENAMQ9NRM1 1142 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 C14orf105Q9NVL8 296 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 DNAJB12Q9NXW2 375 aaKnown RBP9.96□□□□□ -0.82
CLDND1-227ENST00000513452 SMARCAL1Q9NZC9 954 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 ZC3H7BQ9UGR2 993 aaKnown RBP9.96□□□□□ -0.82
CLDND1-227ENST00000513452 ST6GALNAC2Q9UJ37 374 aa9.96□□□□□ -0.82
CLDND1-227ENST00000513452 AKAP6Q13023 2319 aa9.95□□□□□ -0.82
CLDND1-227ENST00000513452 JMJD1CQ15652 2540 aa9.95□□□□□ -0.82
CLDND1-227ENST00000513452 LOC102723996A0A087X1L8 192 aa9.95□□□□□ -0.82
CLDND1-227ENST00000513452 LOC105369274A0A096LPK9 316 aa9.95□□□□□ -0.82
CLDND1-227ENST00000513452 TRBV5-4A0A0C4DH59 114 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms