RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SHMT2P34897 504 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 RORAP35398 523 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 NSG1P42857 185 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 LMAN1P49257 510 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 ABRQ12979 859 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 CHAF1BQ13112 559 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 MSLNQ13421 630 aaPredicted RBP6.94□□□□□ -1.3
USP46-208ENST00000512656 BOP1Q14137 746 aaKnown RBP6.94□□□□□ -1.3
USP46-208ENST00000512656 NCF4Q15080 339 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 NADK2Q4G0N4 442 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 ZBTB37Q5TC79 503 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 DENND5AQ6IQ26 1287 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 SPESP1Q6UW49 350 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 LINC00523Q86TU6 105 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 KLHDC8BQ8IXV7 354 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 TBC1D21Q8IYX1 336 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 TXLNBQ8N3L3 684 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 LILRA3Q8N6C8 439 aaPredicted RBP6.94□□□□□ -1.3
USP46-208ENST00000512656 UBL4BQ8N7F7 174 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 GLIS1Q8NBF1 620 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 SLC38A9Q8NBW4 561 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 PHC3Q8NDX5 983 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 OR1L3Q8NH93 324 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 CCDC110Q8TBZ0 833 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 ADAMTS17Q8TE56 1095 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 STYXQ8WUJ0 223 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 NAT14Q8WUY8 206 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 SGSM3Q96HU1 749 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 DNAJC1Q96KC8 554 aaKnown RBP6.94□□□□□ -1.3
USP46-208ENST00000512656 PPM1MQ96MI6 270 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 TRAPPC9Q96Q05 1148 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 PANX2Q96RD6 677 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 HGH1Q9BTY7 390 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 CHRNA10Q9GZZ6 450 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 FAM96AQ9H5X1 160 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 NLE1Q9NVX2 485 aaPredicted RBP6.94□□□□□ -1.3
USP46-208ENST00000512656 GPR83Q9NYM4 423 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 ACTR10Q9NZ32 417 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 SMARCAL1Q9NZC9 954 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 C5AR2Q9P296 337 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 SRPK3Q9UPE1 567 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 ASF1AQ9Y294 204 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 ICE1Q9Y2F5 2266 aa6.94□□□□□ -1.3
USP46-208ENST00000512656 LRBAP50851 2863 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 A6NL46 340 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ERI2A8K979 691 aaKnown RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 MIF4GDA9UHW6 222 aaKnown RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 PEX12O00623 359 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ZNF185O15231 689 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 OR2B3O76000 313 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 SORBS2O94875 1100 aaKnown RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 RPN2P04844 631 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 CAPN1P07384 714 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 OR56A5P0C7T3 313 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 SPTBP11277 2137 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 GNLYP22749 145 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 MSNP26038 577 aaKnown RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 PDHA2P29803 388 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 PPARGP37231 505 aaPredicted RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 PRKG2Q13237 762 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 OLIG2Q13516 323 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ATP1A4Q13733 1029 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 SPARCL1Q14515 664 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ITIH4Q14624 930 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ESPL1Q14674 2120 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 SSPNQ14714 243 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 POU6F1Q14863 301 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 KIR2DS3Q14952 304 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 INPP5JQ15735 1006 aaPredicted RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 PTCHD3Q3KNS1 767 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ZNF658BQ4V348 819 aaPredicted RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 SYTL3Q4VX76 610 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ZNF789Q5FWF6 425 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 VWA5B1Q5TIE3 1220 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 PRAMEF17Q5VTA0 474 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 MLIPQ5VWP3 458 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 LYPLAL1Q5VWZ2 237 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 RHBDD2Q6NTF9 364 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 JMJD6Q6NYC1 403 aaPredicted RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 TLDC1Q6P9B6 456 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 FAM198BQ6UWH4 519 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 PACS1Q6VY07 963 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 CDHR3Q6ZTQ4 885 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ADGRF3Q8IZF5 1079 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 SYCE1Q8N0S2 351 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 CLDN19Q8N6F1 224 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 C19orf47Q8N9M1 422 aaKnown RBP6.93□□□□□ -1.3
USP46-208ENST00000512656 FAM71DQ8N9W8 422 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 CLEC1AQ8NC01 280 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 FDCSPQ8NFU4 85 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 PROKR1Q8TCW9 393 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 DENND1AQ8TEH3 1009 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 TM9SF4Q92544 642 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 ELMO1Q92556 727 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 PNPLA2Q96AD5 504 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 CDKN2AIPNLQ96HQ2 116 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 FER1L6-AS2Q96M78 137 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 FAM118BQ9BPY3 351 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 TSSK1BQ9BXA7 367 aa6.93□□□□□ -1.3
USP46-208ENST00000512656 AP1M1Q9BXS5 423 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms