RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 GPATCH11Q8N954 259 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 OR2L3Q8NG85 312 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 ANKRD7Q92527 254 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 TTC9Q92623 222 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 RNF31Q96EP0 1072 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 SPRTNQ9H040 489 aaPredicted RBP11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 PARVBQ9HBI1 364 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 LHX9Q9NQ69 397 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 IL17BQ9UHF5 180 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 IKZF3Q9UKT9 509 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 PLCL2Q9UPR0 1127 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 PCDHGA6Q9Y5G7 932 aa11.3□□□□□ -0.6
HMGXB3-203ENST00000510472 FAM208BQ5VWN6 2430 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 IGKV1-8A0A0C4DH67 115 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 FAM95CA0A1B0GW59 222 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 OR2A25A4D2G3 310 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 MEN1O00255 615 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 MAP3K7O43318 606 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 CTSVO60911 334 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 CPNE3O75131 537 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 RECKO95980 971 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 ZNF37AP17032 561 aaPredicted RBP11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 ITGA1P56199 1179 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 PRDX1Q06830 199 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 SP140Q13342 867 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 KBTBD12Q3ZCT8 623 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 CRTC2Q53ET0 693 aaPredicted RBP11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 LCN10Q6JVE6 187 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 FBXO42Q6P3S6 717 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 TMEM126BQ8IUX1 230 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 MCATQ8IVS2 390 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 CEP97Q8IW35 865 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 CEP112Q8N8E3 955 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 MCOLN3Q8TDD5 553 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 LINGO1Q96FE5 620 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 VPS39Q96JC1 886 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 CCDC138Q96M89 665 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 MIPEPQ99797 713 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 CPNE1Q99829 537 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 GPN2Q9H9Y4 310 aaPredicted RBP11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 PCMTD2Q9NV79 361 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 EURLQ9NYK6 297 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 CROTQ9UKG9 612 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 MTO1Q9Y2Z2 717 aaKnown RBP11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 NBEAQ8NFP9 2946 aa11.29□□□□□ -0.6
HMGXB3-203ENST00000510472 ZNF839A8K0R7 811 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 E7EQ34 232 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 ZNF749O43361 778 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 NRP2O60462 931 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 CAPN1P07384 714 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 CCNYL3P0C7X3 344 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 GP5P40197 560 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 POU4F1Q01851 419 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 RHDQ02161 417 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 RELAQ04206 551 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 DEFB110Q30KQ9 67 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 SOWAHCQ53LP3 525 aaPredicted RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 UBAP2Q5T6F2 1119 aaKnown RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 ZNF425Q6IV72 752 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 RHBDD2Q6NTF9 364 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 FAM199XQ6PEV8 388 aaPredicted RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 SUSD1Q6UWL2 747 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 CCDC25Q86WR0 208 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 DSELQ8IZU8 1212 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 MYO1HQ8N1T3 1032 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 LSM14AQ8ND56 463 aaKnown RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 FBF1Q8TES7 1133 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 CT55Q8WUE5 264 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 ANKRD49Q8WVL7 239 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 CDKL2Q92772 493 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 WBP1Q96G27 269 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 GPR22Q99680 433 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 EFHD1Q9BUP0 239 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 FUT8Q9BYC5 575 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 FAM117AQ9C073 453 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 ACTR5Q9H9F9 607 aaPredicted RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 L2HGDHQ9H9P8 463 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 FANCEQ9HB96 536 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 POPDC3Q9HBV1 291 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 SLC6A20Q9NP91 592 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 INTS7Q9NVH2 962 aaKnown RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 STOX2Q9P2F5 926 aaPredicted RBP11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 AP1M2Q9Y6Q5 423 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 SEC16AO15027 2179 aa11.28□□□□□ -0.6
HMGXB3-203ENST00000510472 FITM1A5D6W6 292 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 C21orf140B9A014 251 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 NKX2-8O15522 239 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 SRPX2O60687 465 aaPredicted RBP11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 OR2B3O76000 313 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 ONECUT2O95948 504 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 CYP2A7P20853 494 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 DLSTP36957 453 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 CSRP3P50461 194 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 CYP4F2P78329 520 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 ABATP80404 500 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 ZNF460Q14592 562 aa11.27□□□□□ -0.61
HMGXB3-203ENST00000510472 ZKSCAN8Q15776 578 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms