RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 PNLIPRP1P54315 467 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 TAP2Q03519 686 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 ABHD18Q0P651 414 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 TTLL9Q3SXZ7 439 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 TMTC4Q5T4D3 741 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 C1orf189Q5VU69 101 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 ZNF385CQ66K41 422 aaPredicted RBP13.04□□□□□ -0.32
SNF8-206ENST00000509989 FRMPD2BQ6IN97 320 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 C3orf62Q6ZUJ4 267 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 SHISA5Q8N114 240 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 CARFQ8N187 725 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 SPATA6LQ8N4H0 392 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 OR2L3Q8NG85 312 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 HMGCLL1Q8TB92 370 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 FBF1Q8TES7 1133 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 EXTL1Q92935 676 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 FOPNLQ96NB1 174 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 GPN2Q9H9Y4 310 aaPredicted RBP13.04□□□□□ -0.32
SNF8-206ENST00000509989 PCMTD2Q9NV79 361 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 CUEDC1Q9NWM3 386 aaPredicted RBP13.04□□□□□ -0.32
SNF8-206ENST00000509989 TAS2R13Q9NYV9 303 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 SPATA7Q9P0W8 599 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.04□□□□□ -0.32
SNF8-206ENST00000509989 KLHL42Q9P2K6 505 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 SCN2AQ99250 2005 aa13.04□□□□□ -0.32
SNF8-206ENST00000509989 LOC105369274A0A096LPK9 316 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 LOC102723532A0A0G2JNH3 316 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 CDC7O00311 574 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 EIF3HO15372 352 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNF8-206ENST00000509989 WISP3O95389 354 aaPredicted RBP13.03□□□□□ -0.32
SNF8-206ENST00000509989 STATHP02808 62 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 CATP04040 527 aaKnown RBP13.03□□□□□ -0.32
SNF8-206ENST00000509989 ITGAXP20702 1163 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 RORAP35398 523 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 UCNP55089 124 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 LY6DQ14210 128 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 MAP7Q14244 749 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 KBTBD12Q3ZCT8 623 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 FAM45BPQ6NSW5 357 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 FBXO42Q6P3S6 717 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 TTC23LQ6PF05 361 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 PLD3Q8IV08 490 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 OR4N4Q8N0Y3 316 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 ESX1Q8N693 406 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 ZNF655Q8N720 491 aaPredicted RBP13.03□□□□□ -0.32
SNF8-206ENST00000509989 EXD3Q8N9H8 876 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 FAM45AQ8TCE6 357 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 TRIM44Q96DX7 344 aaPredicted RBP13.03□□□□□ -0.32
SNF8-206ENST00000509989 MRRFQ96E11 262 aaKnown RBP13.03□□□□□ -0.32
SNF8-206ENST00000509989 TCTN2Q96GX1 697 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 VPS39Q96JC1 886 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 ATG10Q9H0Y0 220 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 CHST8Q9H2A9 424 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 EURLQ9NYK6 297 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 NINJ2Q9NZG7 142 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 DHCR7Q9UBM7 475 aaKnown RBP13.03□□□□□ -0.32
SNF8-206ENST00000509989 TAC3Q9UHF0 121 aa13.03□□□□□ -0.32
SNF8-206ENST00000509989 A0A0J9YVX5 310 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 CTAGE15A4D2H0 777 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 NPEPPSL1A6NEC2 478 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 PHGDHO43175 533 aaKnown RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 CNOT3O75175 753 aaKnown RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 KATNA1O75449 491 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 CTAGE8P0CG41 777 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 ENO3P13929 434 aaPredicted RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 TCN2P20062 427 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 GCGRP47871 477 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 ITGA1P56199 1179 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 DNASE1L3Q13609 305 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 SLC9A5Q14940 896 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 TBR1Q16650 682 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 C18orf21Q32NC0 220 aaPredicted RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 C16orf46Q6P387 395 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 ZNF517Q6ZMY9 492 aaPredicted RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 CTAGE6Q86UF2 777 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 SLC26A11Q86WA9 606 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 MCATQ8IVS2 390 aaKnown RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 CTAGE4Q8IX94 777 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 DSELQ8IZU8 1212 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 FBXO15Q8NCQ5 510 aaPredicted RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 KIF18AQ8NI77 898 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 IFT81Q8WYA0 676 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 STARD8Q92502 1023 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 MR1Q95460 341 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 DPH7Q9BTV6 452 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 RHOJQ9H4E5 214 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 ACTR5Q9H9F9 607 aaPredicted RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 UTP6Q9NYH9 597 aaKnown RBP13.02□□□□□ -0.33
SNF8-206ENST00000509989 PADI1Q9ULC6 663 aa13.02□□□□□ -0.33
SNF8-206ENST00000509989 SMG1Q96Q15 3661 aaKnown RBP13.01□□□□□ -0.33
SNF8-206ENST00000509989 MEN1O00255 615 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 ZBTB14O43829 449 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 CPNE3O75131 537 aaKnown RBP13.01□□□□□ -0.33
SNF8-206ENST00000509989 C1QL1O75973 258 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 OR2B3O76000 313 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 MSL3P1P0C860 447 aa13.01□□□□□ -0.33
SNF8-206ENST00000509989 ZNF37AP17032 561 aaPredicted RBP13.01□□□□□ -0.33
SNF8-206ENST00000509989 CYP2A7P20853 494 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms