RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CMPK2Q5EBM0 449 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 DCST1Q5T197 706 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 MLIPQ5VWP3 458 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PLEKHA7Q6IQ23 1121 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CDC73Q6P1J9 531 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ABHD17CQ6PCB6 329 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 RFWD3Q6PCD5 774 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TMIGD1Q6UXZ0 262 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 DLK2Q6UY11 383 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TRILQ7L0X0 811 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 YTHDF3Q7Z739 585 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 LINC00523Q86TU6 105 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CDR2LQ86X02 465 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CXorf67Q86X51 503 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PPP1R3BQ86XI6 285 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF573Q86YE8 665 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 SLC13A5Q86YT5 568 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 MMAAQ8IVH4 418 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GID4Q8IVV7 300 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ARHGEF19Q8IW93 802 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 KATNAL2Q8IYT4 538 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GHDCQ8N2G8 530 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GALNT4Q8N4A0 578 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CPSF7Q8N684 471 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 C12orf29Q8N999 325 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 MLKLQ8NB16 471 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PDPRQ8NCN5 879 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 C17orf47Q8NEP4 570 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 OR7D4Q8NG98 312 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 OR6Q1Q8NGQ2 317 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 NDNFQ8TB73 568 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TAS1R2Q8TE23 839 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 KCTD4Q8WVF5 259 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PRPF31Q8WWY3 499 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 RLN3Q8WXF3 142 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PTPRN2Q92932 1015 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CD101Q93033 1021 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 APOPT1Q96IL0 206 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 FOXN4Q96NZ1 517 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 KLHL5Q96PQ7 755 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CSPG4P5Q96PW8 444 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GCNAQ96QF7 691 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 C11orf70Q9BRQ4 267 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TMEM175Q9BSA9 504 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ZNF577Q9BSK1 485 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 UBAC1Q9BSL1 405 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 PAPOLGQ9BWT3 736 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TLR10Q9BXR5 811 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GLIS2Q9BZE0 524 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 HOXD1Q9GZZ0 328 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 VCX2Q9H322 139 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ABHD16BQ9H3Z7 469 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 NOD2Q9HC29 1040 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TUBG2Q9NRH3 451 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 GJB4Q9NTQ9 266 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ETNK2Q9NVF9 386 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ARL8BQ9NVJ2 186 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 NDE1Q9NXR1 346 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 RBAKQ9NYW8 714 aaPredicted RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 IGSF9Q9P2J2 1179 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 ERVK-18Q9QC07 812 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 WARS2Q9UGM6 360 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 CLEC2DQ9UHP7 191 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 TUBD1Q9UJT1 453 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 FZD10Q9ULW2 581 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 RPH3ALQ9UNE2 315 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 HPSEQ9Y251 543 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 BTBD3Q9Y2F9 522 aa4.41□□□□□ -1.7
NIPBL-206ENST00000509429 WBP11Q9Y2W2 641 aaKnown RBP4.41□□□□□ -1.7
NIPBL-206ENST00000509429 YEATS2Q9ULM3 1422 aa4.4□□□□□ -1.7
NIPBL-206ENST00000509429 PIK3C2BO00750 1634 aa4.4□□□□□ -1.7
NIPBL-206ENST00000509429 CAMSAP1Q5T5Y3 1602 aa4.4□□□□□ -1.7
NIPBL-206ENST00000509429 KIF20BQ96Q89 1820 aa4.4□□□□□ -1.7
NIPBL-206ENST00000509429 H7C0C1 242 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MYO1FO00160 1098 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PFDN6O15212 129 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SLC22A1O15245 554 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 EIF3HO15372 352 aaKnown RBP eCLIP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SEPT4O43236 478 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PPIP5K2O43314 1243 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TGM5O43548 720 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 UGDHO60701 494 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MAGEC1O60732 1142 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 OPHN1O60890 802 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 B4GALT2O60909 372 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MITFO75030 526 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 MFAP3LO75121 409 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 DEXIO95424 95 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SNAP29O95721 258 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 GNAI2P04899 355 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 STAG3L2P0CL84 134 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 GFAPP14136 432 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 TNNI3P19429 210 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SRMP19623 302 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 NCF2P19878 526 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 PON1P27169 355 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 EPHA8P29322 1005 aaPredicted RBP4.4□□□□□ -1.71
NIPBL-206ENST00000509429 ICAM3P32942 547 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 RYKP34925 604 aa4.4□□□□□ -1.71
NIPBL-206ENST00000509429 SREBF1P36956 1147 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms