RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 OR1D4P47884 311 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 CDK16Q00536 496 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 AIMP2Q13155 320 aaKnown RBP14.74□□□□□ -0.05
TPM3-219ENST00000509409 TRIP13Q15645 432 aaPredicted RBP14.74□□□□□ -0.05
TPM3-219ENST00000509409 NKG7Q16617 165 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 IRAK1BP1Q5VVH5 260 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 CASC4Q6P4E1 433 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 SSC4DQ8WTU2 575 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 SNRNP40Q96DI7 357 aaKnown RBP14.74□□□□□ -0.05
TPM3-219ENST00000509409 MRM3Q9HC36 420 aaKnown RBP14.74□□□□□ -0.05
TPM3-219ENST00000509409 HOMER3Q9NSC5 361 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 IL1RAPL1Q9NZN1 696 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 FBXL4Q9UKA2 621 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 CRYL1Q9Y2S2 319 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 MAU2Q9Y6X3 613 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 FAM169AQ9Y6X4 670 aa14.74□□□□□ -0.05
TPM3-219ENST00000509409 TCRBV7S3A2A0A539 114 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 KRT87PA6NCN2 255 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 H3BMM5 538 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 PRICKLE3O43900 615 aaPredicted RBP14.73□□□□□ -0.05
TPM3-219ENST00000509409 SEMA7AO75326 666 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 CCDC175P0C221 793 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 ERVK-10P10266 1014 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 TPSB2P20231 275 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 ITGAXP20702 1163 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 CMPK1P30085 196 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 CXCR5P32302 372 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 VPS41P49754 854 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 TSTA3Q13630 321 aaPredicted RBP14.73□□□□□ -0.05
TPM3-219ENST00000509409 NR6A1Q15406 480 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 TPSAB1Q15661 275 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 RBBP7Q16576 425 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 KCTD19Q17RG1 926 aaPredicted RBP14.73□□□□□ -0.05
TPM3-219ENST00000509409 CTSL3PQ5NE16 218 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 RNF187Q5TA31 235 aaPredicted RBP14.73□□□□□ -0.05
TPM3-219ENST00000509409 PRAMEF13Q5VWM6 474 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 PARP9Q8IXQ6 854 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 NACC2Q96BF6 587 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 VPS50Q96JG6 964 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 TCF12Q99081 682 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 ACAT2Q9BWD1 397 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 WDR54Q9H977 334 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 SLC6A20Q9NP91 592 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 ASF1BQ9NVP2 202 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 SOX13Q9UN79 622 aa14.73□□□□□ -0.05
TPM3-219ENST00000509409 COPG1Q9Y678 874 aaKnown RBP14.73□□□□□ -0.05
TPM3-219ENST00000509409 HYKKA2RU49 373 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 E5RI56 91 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 CTSVO60911 334 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 NIPSNAP2O75323 286 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 ALOX12BO75342 701 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 ONECUT2O95948 504 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 PAMP19021 973 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 GCGRP47871 477 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 SOX8P57073 446 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 OCA2Q04671 838 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 FASTKQ14296 549 aaKnown RBP14.72□□□□□ -0.05
TPM3-219ENST00000509409 ANKRD20A4Q4UJ75 823 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 HIST2H2BCQ6DN03 193 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 FRMPD2BQ6IN97 320 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 IGFL3Q6UXB1 125 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 COX15Q7KZN9 410 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 TRIM58Q8NG06 486 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 OR2L3Q8NG85 312 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 OR9A1PQ8NGU1 263 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 LPGAT1Q92604 370 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 BIRC8Q96P09 236 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 YIPF2Q9BWQ6 316 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 ZBTB20Q9HC78 741 aaPredicted RBP14.72□□□□□ -0.05
TPM3-219ENST00000509409 ZNF304Q9HCX3 659 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 SPATA7Q9P0W8 599 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 CTSFQ9UBX1 484 aa14.72□□□□□ -0.05
TPM3-219ENST00000509409 PLEKHB1Q9UF11 243 aaPredicted RBP14.72□□□□□ -0.05
TPM3-219ENST00000509409 NXT1Q9UKK6 140 aaKnown RBP14.72□□□□□ -0.05
TPM3-219ENST00000509409 LOC105369274A0A096LPK9 316 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 LOC102723532A0A0G2JNH3 316 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 FITM1A5D6W6 292 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 SOCS6O14544 535 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 AVILO75366 819 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 ESR1P03372 595 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 ARNTP27540 789 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 RPA3P35244 121 aaPredicted RBP14.71□□□□□ -0.05
TPM3-219ENST00000509409 GPS1Q13098 491 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 ELOAQ14241 798 aaKnown RBP14.71□□□□□ -0.05
TPM3-219ENST00000509409 TUBB8Q3ZCM7 444 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 AGAP7PQ5VUJ5 663 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 NEPROQ6NW34 567 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 KIRREL2Q6UWL6 708 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 PRSS58Q8IYP2 241 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 OR4N4Q8N0Y3 316 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 OR2A1Q8NGT9 310 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 HMGCLL1Q8TB92 370 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 DNAJB14Q8TBM8 379 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 MIEF2Q96C03 454 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 ZNF285Q96NJ3 590 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 AGAP4Q96P64 663 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 SPSB2Q99619 263 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 DPH7Q9BTV6 452 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 SLC26A1Q9H2B4 701 aa14.71□□□□□ -0.05
TPM3-219ENST00000509409 MRPS30Q9NP92 439 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms