RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 QSOX1O00391 747 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 RASGRF2O14827 1237 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 TTC4O95801 387 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 PAMP19021 973 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 MCM3P25205 808 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 NDUFS1P28331 727 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 PCBP4P57723 403 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 TAS2R39P59534 338 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 ERVPABLB-1P60509 514 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 MGAT5Q09328 741 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 DLG1Q12959 904 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 EIF3IQ13347 325 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 THOC5Q13769 683 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 PPP1R3AQ16821 1122 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 KLHL38Q2WGJ6 581 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 DNTTIP2Q5QJE6 756 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 HECTD2Q5U5R9 776 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 CACHD1Q5VU97 1274 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 FCRL6Q6DN72 434 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 PAQR3Q6TCH7 311 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 SPESP1Q6UW49 350 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 LYPD4Q6UWN0 246 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 SBSNQ6UWP8 590 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 CDHR3Q6ZTQ4 885 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 AMIGO1Q86WK6 493 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 OOSP2Q86WS3 158 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM129CQ86XR2 697 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 TBC1D21Q8IYX1 336 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 D2HGDHQ8N465 521 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 TMEM151AQ8N4L1 468 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 SLC38A9Q8NBW4 561 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 PPFIBP2Q8ND30 876 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 AGBL5Q8NDL9 886 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 OR1L3Q8NH93 324 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 CFAP61Q8NHU2 1237 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 LCN9Q8WX39 176 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 GTPBP3Q969Y2 492 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 TMEM159Q96B96 161 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 GRAMD1AQ96CP6 724 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF501Q96CX3 271 aaPredicted RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 LRRC39Q96DD0 335 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 AHCYL2Q96HN2 611 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 FCRL4Q96PJ5 515 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 PKP4Q99569 1192 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 DDA1Q9BW61 102 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 TXLNGYQ9BZA5 131 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 UNKQ9C0B0 810 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 STRADBQ9C0K7 418 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 TRIT1Q9H3H1 467 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 CDC42EP4Q9H3Q1 356 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 CPNE5Q9HCH3 593 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 GPAMQ9HCL2 828 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 ENAMQ9NRM1 1142 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 TDRKHQ9Y2W6 561 aaKnown RBP6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 DHRS7Q9Y394 339 aa6.95□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM208BQ5VWN6 2430 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 LOC101059948A0A1B0GTJ6 334 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM95CA0A1B0GW59 222 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 GSAPA4D1B5 854 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 GFYI3L273 518 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 IFRD1O00458 451 aaPredicted RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 EIF3HO15372 352 aaKnown RBP eCLIP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 NVLO15381 856 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 PHGDHO43175 533 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 CTSVO60911 334 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 CNOT3O75175 753 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 APOA4P06727 396 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 CAPN1P07384 714 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM153BP0C7A2 387 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 JMJD7P0C870 316 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 MPC1LP0DKB6 136 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ZNF37AP17032 561 aaPredicted RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 AMD1P17707 334 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 MAGP20916 626 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 GCAP28676 217 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 IMPA1P29218 277 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 PRDX3P30048 256 aaKnown RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 SHMT2P34897 504 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 MAGEA4P43358 317 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 RAB28P51157 221 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 NFKB2Q00653 900 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 BIRC2Q13490 618 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 BMPR2Q13873 1038 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 TMED2Q15363 201 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ZKSCAN8Q15776 578 aaPredicted RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 CYP2A13Q16696 494 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 C18orf21Q32NC0 220 aaPredicted RBP6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 KBTBD12Q3ZCT8 623 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM153CQ494X1 144 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ATP1A1-AS1Q5TC04 95 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 FAM69BQ5VUD6 431 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 PWWP2BQ6NUJ5 590 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 KIAA0408Q6ZU52 694 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 OTOAQ7RTW8 1153 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 STRA8Q7Z7C7 330 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 CMC1Q7Z7K0 106 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 PLXDC1Q8IUK5 500 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 LMNTD2Q8IXW0 634 aa6.94□□□□□ -1.3
TOPBP1-207ENST00000509162 ARHGEF39Q8N4T4 335 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms