RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TBC1D15Q8TC07 691 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 TMBIM1Q969X1 311 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 ERLEC1Q96DZ1 483 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 COX4I2Q96KJ9 171 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 CDK15Q96Q40 435 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 ACOX2Q99424 681 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 RBM4BQ9BQ04 359 aaKnown RBP10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 BCL7BQ9BQE9 202 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 RBM4Q9BWF3 364 aaKnown RBP10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 NSUN3Q9H649 340 aaKnown RBP10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 MAGIXQ9H6Y5 334 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 NTN4Q9HB63 628 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 ASIC5Q9NY37 505 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 ZDHHC3Q9NYG2 299 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 PSME2Q9UL46 239 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 ITM2BQ9Y287 266 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 B3GNT3Q9Y2A9 372 aa10.74□□□□□ -0.69
SH3RF1-203ENST00000508685 HEPACAM2A8MVW5 462 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 ANKRD28O15084 1053 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 LSM1O15116 133 aaKnown RBP10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 G6PDP11413 515 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 TIMP2P16035 220 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 FSHRP23945 695 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 GTF2H2Q13888 395 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 GRIN2CQ14957 1233 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 NR6A1Q15406 480 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 PHKG1Q16816 387 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 AP5B1Q2VPB7 878 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 GTF2H2CQ6P1K8 395 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 MILR1Q7Z6M3 343 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 ADHFE1Q8IWW8 467 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 OFCC1Q8IZS5 231 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 DTWD1Q8N5C7 304 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 PJA1Q8NG27 643 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 OR2T12Q8NG77 320 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 TRUB1Q8WWH5 349 aaKnown RBP10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 MUS81Q96NY9 551 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 DCUN1D5Q9BTE7 237 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 PAIP1Q9H074 479 aaKnown RBP10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 ZDHHC4Q9NPG8 344 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 LATS2Q9NRM7 1088 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 ELOVL2Q9NXB9 296 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 LMCD1Q9NZU5 365 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 SLAMF8Q9P0V8 285 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 TRIOO75962 3097 aa10.73□□□□□ -0.69
SH3RF1-203ENST00000508685 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 IGLV3-16A0A075B6K0 115 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 A0A1W2PQ67 120 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 UPK3BL1B0FP48 263 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 UPK3BL2E5RIL1 263 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 UPK1AO00322 258 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 KPNA3O00505 521 aaPredicted RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 LINC01565O15544 149 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 FFAR2O15552 330 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 BCL10O95999 233 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 HNRNPCP07910 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 INHBBP09529 407 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 FCARP24071 287 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 VIPR1P32241 457 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 CCR7P32248 378 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 MTHFRP42898 656 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 PTPN5P54829 565 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 YBX1P67809 324 aaKnown RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 CTBSQ01459 385 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 NFATC3Q12968 1075 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 PLCL1Q15111 1095 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 PLA2G4EQ3MJ16 856 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 ZNF805Q5CZA5 627 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 ZC3H12BQ5HYM0 836 aaKnown RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 CACHD1Q5VU97 1274 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 TMEM26Q6ZUK4 368 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 PARS2Q7L3T8 475 aaKnown RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 GOLGA7Q7Z5G4 137 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 STK32CQ86UX6 486 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 SLC13A3Q8WWT9 602 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 HSPBAP1Q96EW2 488 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 ZNF583Q96ND8 569 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 RHBDL2Q9NX52 303 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 SLC27A6Q9Y2P4 619 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 COL4A3Q01955 1670 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 NFATC1O95644 943 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 CLIC3O95833 236 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 RETP07949 1114 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 SRPRAP08240 638 aaKnown RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 ZNF30P17039 623 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 DGKAP23743 735 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 CRHBPP24387 322 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 NFKBIAP25963 317 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 RPL10P27635 214 aaKnown RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 PIK3CGP48736 1102 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 ST8SIA6P61647 398 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 KIAA0040Q15053 153 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 NEDD8Q15843 81 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 MAPKAPK3Q16644 382 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 OTUD3Q5T2D3 398 aaPredicted RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 ZNF648Q5T619 568 aaPredicted RBP10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 ATG9BQ674R7 924 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 TANGO2Q6ICL3 276 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 SULT1C3Q6IMI6 304 aa10.72□□□□□ -0.69
SH3RF1-203ENST00000508685 ANKRD26P1Q6NSI1 321 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms