RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 TERF1P54274 439 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ADARP55265 1226 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 NXPH1P58417 271 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 KRTAP10-2P60368 255 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 HNRNPKP61978 463 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 SRSF2Q01130 221 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 NHLH1Q02575 133 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PLOD1Q02809 727 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PPARDQ03181 441 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TMEM115Q12893 351 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 NAB1Q13506 487 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 THOC5Q13769 683 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 GTF2H3Q13889 308 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PDE1CQ14123 709 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CRYMQ14894 314 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PTPRRQ15256 657 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CHRNA6Q15825 494 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CSRP2Q16527 193 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 RNF151Q2KHN1 245 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 MUM1Q2TAK8 710 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 MAP9Q49MG5 647 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ATP13A5Q4VNC0 1218 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZRANB3Q5FWF4 1079 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TOR2AQ5JU69 321 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TMEM200BQ69YZ2 307 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 NEPROQ6NW34 567 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 EMBQ6PCB8 327 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 FAM151BQ6UXP7 276 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PACS1Q6VY07 963 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CCNI2Q6ZMN8 369 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 C3orf62Q6ZUJ4 267 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TRMT10CQ7L0Y3 403 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PTAR1Q7Z6K3 402 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PARGQ86W56 976 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 SLC26A11Q86WA9 606 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 HEATR4Q86WZ0 1026 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 LYSMD2Q8IV50 215 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CNTN4Q8IWV2 1026 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 RBFAQ8N0V3 343 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 LGI4Q8N135 537 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 FSTL5Q8N475 847 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 DEFB119Q8N690 84 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PLA2G15Q8NCC3 412 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 FBXO36Q8NEA4 188 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 OR56A4Q8NGH8 313 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 OR5AN1Q8NGI8 311 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 GDAP1Q8TB36 358 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CDKL2Q92772 493 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 FUBP1Q96AE4 644 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 DCUN1D1Q96GG9 259 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZNF778Q96MU6 729 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TSSK1BQ9BXA7 367 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 FUT8Q9BYC5 575 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 QRSL1Q9H0R6 528 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ARRDC1-AS1Q9H2J1 176 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ANKZF1Q9H8Y5 726 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 VPS37BQ9H9H4 285 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 SAYSD1Q9NPB0 183 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TMEM74BQ9NUR3 256 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 INTS10Q9NVR2 710 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PIH1D1Q9NWS0 290 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 TRNAU1APQ9NX07 287 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 MOCS1Q9NZB8 636 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 NCDNQ9UBB6 729 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CD84Q9UIB8 345 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ZNF180Q9UJW8 692 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 RAB21Q9UL25 225 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PNMA8BQ9ULN7 279 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CORO1CQ9ULV4 474 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CHMP2BQ9UQN3 213 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ANKRD6Q9Y2G4 727 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PCDHB1Q9Y5F3 818 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PCDHGB2Q9Y5G2 931 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 COMMD10Q9Y6G5 202 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 MYO15AQ9UKN7 3530 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 PCNX2A6NKB5 2137 aa5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 ASCC3Q8N3C0 2202 aaKnown RBP5.39□□□□□ -1.55
HMGB1P44-201ENST00000508597 CNOT1A5YKK6 2376 aaKnown RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 KNTC1P50748 2209 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 A0A0U1RQS6 177 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 NEMP2A6NFY4 417 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 K7ESM1 405 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 MATN2O00339 956 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 PRMT5O14744 637 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 TPP1O14773 563 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 KMOO15229 486 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 BUD23O43709 281 aaKnown RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 ERLIN1O75477 346 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 NDUFS3O75489 264 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CDK14O94921 469 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 PLATP00750 562 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 WNT1P04628 370 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CFIP05156 583 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 ABHD2P08910 425 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 ATP1B2P14415 290 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 VCLP18206 1134 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 CD9P21926 228 aa5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 BUD31P41223 144 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 LEPRP48357 1165 aaKnown RBP5.38□□□□□ -1.55
HMGB1P44-201ENST00000508597 POLD2P49005 469 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms