RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 CCL4P13236 92 aa8.81□□□□□ -1
NUP54-207ENST00000508583 HGFP14210 728 aa8.81□□□□□ -1
NUP54-207ENST00000508583 ITIH1P19827 911 aa8.81□□□□□ -1
NUP54-207ENST00000508583 IMPA1P29218 277 aa8.81□□□□□ -1
NUP54-207ENST00000508583 SLC5A2P31639 672 aa8.81□□□□□ -1
NUP54-207ENST00000508583 TAP2Q03519 686 aa8.81□□□□□ -1
NUP54-207ENST00000508583 IFFO1Q0D2I5 559 aa8.81□□□□□ -1
NUP54-207ENST00000508583 CSHL1Q14406 222 aa8.81□□□□□ -1
NUP54-207ENST00000508583 ZNF460Q14592 562 aa8.81□□□□□ -1
NUP54-207ENST00000508583 ACAP2Q15057 778 aa8.81□□□□□ -1
NUP54-207ENST00000508583 ERCC6LQ2NKX8 1250 aa8.81□□□□□ -1
NUP54-207ENST00000508583 TSNAXIP1Q2TAA8 658 aa8.81□□□□□ -1
NUP54-207ENST00000508583 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.81□□□□□ -1
NUP54-207ENST00000508583 PRAMEF13Q5VWM6 474 aa8.81□□□□□ -1
NUP54-207ENST00000508583 AGTRAPQ6RW13 159 aa8.81□□□□□ -1
NUP54-207ENST00000508583 SBSNQ6UWP8 590 aa8.81□□□□□ -1
NUP54-207ENST00000508583 LRRC69Q6ZNQ3 347 aa8.81□□□□□ -1
NUP54-207ENST00000508583 TAX1BP1Q86VP1 789 aa8.81□□□□□ -1
NUP54-207ENST00000508583 GPSM1Q86YR5 675 aa8.81□□□□□ -1
NUP54-207ENST00000508583 GSPT2Q8IYD1 628 aaKnown RBP8.81□□□□□ -1
NUP54-207ENST00000508583 RIBC1Q8N443 379 aaPredicted RBP8.81□□□□□ -1
NUP54-207ENST00000508583 TBC1D19Q8N5T2 526 aa8.81□□□□□ -1
NUP54-207ENST00000508583 BMPERQ8N8U9 685 aa8.81□□□□□ -1
NUP54-207ENST00000508583 OR2L3Q8NG85 312 aa8.81□□□□□ -1
NUP54-207ENST00000508583 RHEBL1Q8TAI7 183 aa8.81□□□□□ -1
NUP54-207ENST00000508583 MDM1Q8TC05 714 aa8.81□□□□□ -1
NUP54-207ENST00000508583 ZNF480Q8WV37 535 aa8.81□□□□□ -1
NUP54-207ENST00000508583 CAVIN3Q969G5 261 aa8.81□□□□□ -1
NUP54-207ENST00000508583 ISL2Q96A47 359 aa8.81□□□□□ -1
NUP54-207ENST00000508583 KIAA1191Q96A73 305 aa8.81□□□□□ -1
NUP54-207ENST00000508583 MED8Q96G25 268 aa8.81□□□□□ -1
NUP54-207ENST00000508583 PRR11Q96HE9 360 aaPredicted RBP8.81□□□□□ -1
NUP54-207ENST00000508583 UBXN10Q96LJ8 280 aa8.81□□□□□ -1
NUP54-207ENST00000508583 IL17FQ96PD4 163 aa8.81□□□□□ -1
NUP54-207ENST00000508583 TRAPPC9Q96Q05 1148 aa8.81□□□□□ -1
NUP54-207ENST00000508583 EGFL8Q99944 293 aa8.81□□□□□ -1
NUP54-207ENST00000508583 DPH1Q9BZG8 443 aa8.81□□□□□ -1
NUP54-207ENST00000508583 FGF21Q9NSA1 209 aa8.81□□□□□ -1
NUP54-207ENST00000508583 OCIAD1Q9NX40 245 aa8.81□□□□□ -1
NUP54-207ENST00000508583 SPHK1Q9NYA1 384 aa8.81□□□□□ -1
NUP54-207ENST00000508583 STOX2Q9P2F5 926 aaPredicted RBP8.81□□□□□ -1
NUP54-207ENST00000508583 CIDEBQ9UHD4 219 aa8.81□□□□□ -1
NUP54-207ENST00000508583 ADAMTS6Q9UKP5 1117 aa8.81□□□□□ -1
NUP54-207ENST00000508583 RNF112Q9ULX5 631 aa8.81□□□□□ -1
NUP54-207ENST00000508583 TMCO1Q9UM00 188 aa8.81□□□□□ -1
NUP54-207ENST00000508583 SNX7Q9UNH6 387 aa8.81□□□□□ -1
NUP54-207ENST00000508583 KLK4Q9Y5K2 254 aa8.81□□□□□ -1
NUP54-207ENST00000508583 AP1M2Q9Y6Q5 423 aa8.81□□□□□ -1
NUP54-207ENST00000508583 PCM1Q15154 2024 aa8.81□□□□□ -1
NUP54-207ENST00000508583 ANKRD12Q6UB98 2062 aa8.81□□□□□ -1
NUP54-207ENST00000508583 NPEPPSL1A6NEC2 478 aa8.8□□□□□ -1
NUP54-207ENST00000508583 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.8□□□□□ -1
NUP54-207ENST00000508583 AGRPO00253 132 aa8.8□□□□□ -1
NUP54-207ENST00000508583 PRICKLE3O43900 615 aaPredicted RBP8.8□□□□□ -1
NUP54-207ENST00000508583 PRAMEF10O60809 474 aa8.8□□□□□ -1
NUP54-207ENST00000508583 KERAO60938 352 aa8.8□□□□□ -1
NUP54-207ENST00000508583 CDH16O75309 829 aa8.8□□□□□ -1
NUP54-207ENST00000508583 KLHL2O95198 593 aa8.8□□□□□ -1
NUP54-207ENST00000508583 GUCA1CO95843 209 aa8.8□□□□□ -1
NUP54-207ENST00000508583 C2P06681 752 aa8.8□□□□□ -1
NUP54-207ENST00000508583 RBP1P09455 135 aa8.8□□□□□ -1
NUP54-207ENST00000508583 EBLN1P0CF75 366 aa8.8□□□□□ -1
NUP54-207ENST00000508583 TPBGLP0DKB5 382 aa8.8□□□□□ -1
NUP54-207ENST00000508583 MYBL2P10244 700 aa8.8□□□□□ -1
NUP54-207ENST00000508583 LIPCP11150 499 aa8.8□□□□□ -1
NUP54-207ENST00000508583 EZRP15311 586 aaKnown RBP8.8□□□□□ -1
NUP54-207ENST00000508583 CD1DP15813 335 aa8.8□□□□□ -1
NUP54-207ENST00000508583 ST6GAL1P15907 406 aa8.8□□□□□ -1
NUP54-207ENST00000508583 MAGP20916 626 aa8.8□□□□□ -1
NUP54-207ENST00000508583 PEBP1P30086 187 aaKnown RBP8.8□□□□□ -1
NUP54-207ENST00000508583 GRK3P35626 688 aa8.8□□□□□ -1
NUP54-207ENST00000508583 ITGA1P56199 1179 aa8.8□□□□□ -1
NUP54-207ENST00000508583 TBPL1P62380 186 aa8.8□□□□□ -1
NUP54-207ENST00000508583 RELAQ04206 551 aa8.8□□□□□ -1
NUP54-207ENST00000508583 PRDX1Q06830 199 aaKnown RBP8.8□□□□□ -1
NUP54-207ENST00000508583 BMPR2Q13873 1038 aa8.8□□□□□ -1
NUP54-207ENST00000508583 MAP7Q14244 749 aa8.8□□□□□ -1
NUP54-207ENST00000508583 RASA2Q15283 850 aa8.8□□□□□ -1
NUP54-207ENST00000508583 TGFBIQ15582 683 aa8.8□□□□□ -1
NUP54-207ENST00000508583 TSNQ15631 228 aaKnown RBP8.8□□□□□ -1
NUP54-207ENST00000508583 PHKG1Q16816 387 aa8.8□□□□□ -1
NUP54-207ENST00000508583 PPP1R3AQ16821 1122 aa8.8□□□□□ -1
NUP54-207ENST00000508583 CCSMST1Q4G0I0 132 aa8.8□□□□□ -1
NUP54-207ENST00000508583 TCTE1Q5JU00 501 aa8.8□□□□□ -1
NUP54-207ENST00000508583 BROXQ5VW32 411 aa8.8□□□□□ -1
NUP54-207ENST00000508583 ICE2Q659A1 982 aa8.8□□□□□ -1
NUP54-207ENST00000508583 SULT1C3Q6IMI6 304 aa8.8□□□□□ -1
NUP54-207ENST00000508583 TLDC1Q6P9B6 456 aa8.8□□□□□ -1
NUP54-207ENST00000508583 ADGRD1Q6QNK2 874 aa8.8□□□□□ -1
NUP54-207ENST00000508583 LCTLQ6UWM7 567 aa8.8□□□□□ -1
NUP54-207ENST00000508583 TMEM207Q6UWW9 146 aa8.8□□□□□ -1
NUP54-207ENST00000508583 CMC1Q7Z7K0 106 aa8.8□□□□□ -1
NUP54-207ENST00000508583 C17orf64Q86WR6 236 aa8.8□□□□□ -1
NUP54-207ENST00000508583 PROSER1Q86XN7 944 aa8.8□□□□□ -1
NUP54-207ENST00000508583 C2orf73Q8N5S3 287 aaPredicted RBP8.8□□□□□ -1
NUP54-207ENST00000508583 ESX1Q8N693 406 aa8.8□□□□□ -1
NUP54-207ENST00000508583 OR2A1Q8NGT9 310 aa8.8□□□□□ -1
NUP54-207ENST00000508583 UHMK1Q8TAS1 419 aaKnown RBP8.8□□□□□ -1
NUP54-207ENST00000508583 ACMSDQ8TDX5 336 aa8.8□□□□□ -1
NUP54-207ENST00000508583 AENQ8WTP8 325 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms