RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ZNF830Q96NB3 372 aaPredicted RBP4.26□□□□□ -1.73
DHFR-204ENST00000508282 KRT12Q99456 494 aa4.26□□□□□ -1.73
DHFR-204ENST00000508282 RSPH9Q9H1X1 276 aaPredicted RBP4.26□□□□□ -1.73
DHFR-204ENST00000508282 FAM207AQ9NSI2 230 aaPredicted RBP4.26□□□□□ -1.73
DHFR-204ENST00000508282 MAN2C1Q9NTJ4 1040 aa4.26□□□□□ -1.73
DHFR-204ENST00000508282 OR6C2Q9NZP2 312 aa4.26□□□□□ -1.73
DHFR-204ENST00000508282 PPIEQ9UNP9 301 aaKnown RBP4.26□□□□□ -1.73
DHFR-204ENST00000508282 TMED3Q9Y3Q3 217 aa4.26□□□□□ -1.73
DHFR-204ENST00000508282 SMAD5-AS1Q9Y6J3 95 aa4.26□□□□□ -1.73
DHFR-204ENST00000508282 C15orf61A6NNL5 157 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 IPO8O15397 1037 aaKnown RBP4.25□□□□□ -1.73
DHFR-204ENST00000508282 ADAM20O43506 726 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 GLRA3O75311 464 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 CDK2AP2O75956 126 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 LINGO3P0C6S8 592 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 DARSP14868 501 aaKnown RBP4.25□□□□□ -1.73
DHFR-204ENST00000508282 CYP2A7P20853 494 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 MMP12P39900 470 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 HSPB3Q12988 150 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 ENPP2Q13822 863 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 E2F5Q15329 346 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 CCDC184Q52MB2 194 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 ARMC3Q5W041 872 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 NUP54Q7Z3B4 507 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 THAP8Q8NA92 274 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 OR1L3Q8NH93 324 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 CENPTQ96BT3 561 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 NSMCE3Q96MG7 304 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 AP1M1Q9BXS5 423 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 KLHL4Q9C0H6 718 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 MYNNQ9NPC7 610 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 PANK4Q9NVE7 773 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 HAO2Q9NYQ3 351 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 CHORDC1Q9UHD1 332 aaPredicted RBP4.25□□□□□ -1.73
DHFR-204ENST00000508282 RPS6KA6Q9UK32 745 aa4.25□□□□□ -1.73
DHFR-204ENST00000508282 A0A1W2PPM1 405 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 A0A1W2PPQ1 181 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 NEMP2A6NFY4 417 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.24□□□□□ -1.73
DHFR-204ENST00000508282 MAGEC1O60732 1142 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 SEC24AO95486 1093 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 VTNP04004 478 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 VDRP11473 427 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 ZNF10P21506 573 aaPredicted RBP4.24□□□□□ -1.73
DHFR-204ENST00000508282 CSTF2P33240 577 aaKnown RBP eCLIP4.24□□□□□ -1.73
DHFR-204ENST00000508282 MTHFRP42898 656 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 MAPK12P53778 367 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 NECTIN1Q15223 517 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 TCTE1Q5JU00 501 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 SLC35D3Q5M8T2 416 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 MFSD12Q6NUT3 480 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 LRRTM1Q86UE6 522 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 MMD2Q8IY49 270 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 GPRC5AQ8NFJ5 357 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 TSPAN14Q8NG11 270 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 FAM222BQ8WU58 562 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 DGAT2Q96PD7 388 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 USP28Q96RU2 1077 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 SEPHS2Q99611 448 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 DGCR6LQ9BY27 220 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 ANKZF1Q9H8Y5 726 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 TRPV4Q9HBA0 871 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 PPANQ9NQ55 473 aaKnown RBP4.24□□□□□ -1.73
DHFR-204ENST00000508282 OLAHQ9NV23 265 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 STK26Q9P289 416 aa4.24□□□□□ -1.73
DHFR-204ENST00000508282 CPSF2Q9P2I0 782 aaKnown RBP4.24□□□□□ -1.73
DHFR-204ENST00000508282 MAGED1Q9Y5V3 778 aaPredicted RBP4.24□□□□□ -1.73
DHFR-204ENST00000508282 SMCHD1A6NHR9 2005 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 SYNDIG1LA6NDD5 238 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 EPHB6O15197 1021 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 ERAL1O75616 437 aaKnown RBP4.23□□□□□ -1.73
DHFR-204ENST00000508282 RPN1P04843 607 aaKnown RBP4.23□□□□□ -1.73
DHFR-204ENST00000508282 RAB40ALP0C0E4 278 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 TRIM49P0CI25 452 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 TRIM49CP0CI26 452 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 PTGER4P35408 488 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 HNF4AP41235 474 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 LIG4P49917 911 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 ZNF75DP51815 510 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 UBXN2AP68543 259 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 IL11RAQ14626 422 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 WLSQ5T9L3 541 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 GARNL3Q5VVW2 1013 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 PRR27Q6MZM9 219 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 UGT3A1Q6NUS8 523 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 ENOSF1Q7L5Y1 443 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 G2E3Q7L622 706 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 LYG1Q8N1E2 194 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.23□□□□□ -1.73
DHFR-204ENST00000508282 SLCO2A1Q92959 643 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 THOC1Q96FV9 657 aaKnown RBP4.23□□□□□ -1.73
DHFR-204ENST00000508282 NECTIN4Q96NY8 510 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 GPR88Q9GZN0 384 aa4.23□□□□□ -1.73
DHFR-204ENST00000508282 DDX25Q9UHL0 483 aaKnown RBP4.23□□□□□ -1.73
DHFR-204ENST00000508282 A0A1W2PR80 420 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 PI15O43692 258 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 TRUB2O95900 331 aaKnown RBP4.22□□□□□ -1.73
DHFR-204ENST00000508282 AKR1B1P15121 316 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 UGT1A4P22310 534 aa4.22□□□□□ -1.73
DHFR-204ENST00000508282 NNMTP40261 264 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms