RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 ENAMQ9NRM1 1142 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 C14orf105Q9NVL8 296 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 ZNF148Q9UQR1 794 aa20.13■□□□□ 0.81
SQSTM1-210ENST00000506042 UTP20O75691 2785 aaKnown RBP20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 ANKRD12Q6UB98 2062 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 TRAV17A0A0B4J275 112 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 FITM1A5D6W6 292 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 TXNDC9O14530 226 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 OR1I1O60431 355 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 SUN1O94901 812 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 SLCO2B1O94956 709 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 IFNB1P01574 187 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 ANXA5P08758 320 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 ICAM2P13598 275 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 FBLP22087 321 aaKnown RBP20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 TNFRSF8P28908 595 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 RBPJQ06330 500 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 WASHC2DQ5SRD0 308 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 CNSTQ6PJW8 725 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 C4orf22Q6V702 233 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 SDCCAG8Q86SQ7 713 aaPredicted RBP20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 LINC01555Q8NAE3 123 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 OR11G2Q8NGC1 345 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 OR13J1Q8NGT2 312 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 SPATA7Q9P0W8 599 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 TEKT2Q9UIF3 430 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 TTC7AQ9ULT0 858 aaPredicted RBP20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 MRPS2Q9Y399 296 aaKnown RBP20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 NOTCH2Q04721 2471 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 CCDC88CQ9P219 2028 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 HIVEP3Q5T1R4 2406 aa20.12■□□□□ 0.81
SQSTM1-210ENST00000506042 MYO9AB2RTY4 2548 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 FER1L5A0AVI2 2057 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 SOWAHDA6NJG2 315 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 H3BMM5 538 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 CCNDBP1O95273 360 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 CRYABP02511 175 aaKnown RBP20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 TPBGLP0DKB5 382 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 PKMP14618 531 aaKnown RBP20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 AOAHP28039 575 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 GRIA3P42263 894 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 EMP3P54852 163 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 CASP6P55212 293 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 ACVR1Q04771 509 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 ZRSR2Q15696 482 aaKnown RBP20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 RNF187Q5TA31 235 aaPredicted RBP20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 LINC00696Q6ZRV3 163 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 TAB3Q8N5C8 712 aaPredicted RBP20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 C2orf73Q8N5S3 287 aaPredicted RBP20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 LRRC57Q8N9N7 239 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 HMGCLL1Q8TB92 370 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 STT3BQ8TCJ2 826 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 MARVELD3Q96A59 401 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 CABS1Q96KC9 395 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 ZBTB20Q9HC78 741 aaPredicted RBP20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 FAM114A2Q9NRY5 505 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 SLC22A11Q9NSA0 550 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 RIC8BQ9NVN3 520 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 PAK5Q9P286 719 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 CTSFQ9UBX1 484 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 ZC3H7BQ9UGR2 993 aaKnown RBP20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 C3orf18Q9UK00 162 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 NTNG1Q9Y2I2 539 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 KLHL20Q9Y2M5 609 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 TCAF1Q9Y4C2 921 aa20.11■□□□□ 0.81
SQSTM1-210ENST00000506042 GRID2IPA4D2P6 1211 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 VSTM2BA6NLU5 285 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 CD3EAPO15446 510 aaKnown RBP20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 JRKO75564 520 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 WFS1O76024 890 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 MLYCDO95822 493 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 EIF2S1P05198 315 aaKnown RBP20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 APRTP07741 180 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 ZGLP1P0C6A0 271 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 HSD17B2P37059 387 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 GCGRP47871 477 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 OR1D4P47884 311 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 KLF1Q13351 362 aaPredicted RBP20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 LONRF1Q17RB8 773 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 PCID2Q5JVF3 399 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 MRNIPQ6NTE8 343 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 AADACL2Q6P093 401 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 RIPOR1Q6ZS17 1223 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 SHISA6Q6ZSJ9 500 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 NDUFAF7Q7L592 441 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 OR1N1Q8NGS0 311 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 RERGQ96A58 199 aaPredicted RBP20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 ZNF285Q96NJ3 590 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 ZFYVE21Q9BQ24 234 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 YIPF2Q9BWQ6 316 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 ETNK1Q9HBU6 452 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 ZNF160Q9HCG1 818 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 RAB6BQ9NRW1 208 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 COPG2Q9UBF2 871 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 VPS9D1Q9Y2B5 631 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 KLK4Q9Y5K2 254 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 MAU2Q9Y6X3 613 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 DOPEY1Q5JWR5 2465 aa20.1■□□□□ 0.81
SQSTM1-210ENST00000506042 PCSK5Q92824 1860 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms