RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 ZNF558Q96NG5 402 aa3□□□□□ -1.93
RFC1-209ENST00000504974 NODALQ96S42 347 aa3□□□□□ -1.93
RFC1-209ENST00000504974 TESK2Q96S53 571 aa3□□□□□ -1.93
RFC1-209ENST00000504974 MYADMQ96S97 322 aa3□□□□□ -1.93
RFC1-209ENST00000504974 FAM129AQ9BZQ8 928 aa3□□□□□ -1.93
RFC1-209ENST00000504974 GPR88Q9GZN0 384 aa3□□□□□ -1.93
RFC1-209ENST00000504974 OR10A4Q9H209 315 aa3□□□□□ -1.93
RFC1-209ENST00000504974 S1PR5Q9H228 398 aa3□□□□□ -1.93
RFC1-209ENST00000504974 ANKZF1Q9H8Y5 726 aa3□□□□□ -1.93
RFC1-209ENST00000504974 ECHDC1Q9NTX5 307 aa3□□□□□ -1.93
RFC1-209ENST00000504974 PRMT7Q9NVM4 692 aaPredicted RBP3□□□□□ -1.93
RFC1-209ENST00000504974 KCNG2Q9UJ96 466 aa3□□□□□ -1.93
RFC1-209ENST00000504974 TUBE1Q9UJT0 475 aa3□□□□□ -1.93
RFC1-209ENST00000504974 CPSF3Q9UKF6 684 aaKnown RBP3□□□□□ -1.93
RFC1-209ENST00000504974 RNF150Q9ULK6 438 aa3□□□□□ -1.93
RFC1-209ENST00000504974 SLC7A7Q9UM01 511 aa3□□□□□ -1.93
RFC1-209ENST00000504974 COL5A2P05997 1499 aaPredicted RBP3□□□□□ -1.93
RFC1-209ENST00000504974 FAM208AQ9UK61 1670 aaKnown RBP3□□□□□ -1.93
RFC1-209ENST00000504974 TNS2Q63HR2 1409 aa3□□□□□ -1.93
RFC1-209ENST00000504974 RGPD5Q99666 1765 aa3□□□□□ -1.93
RFC1-209ENST00000504974 PARP4Q9UKK3 1724 aaKnown RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 ANKRD26Q9UPS8 1709 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 TTC21BQ7Z4L5 1316 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 IGSF1Q8N6C5 1336 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 PRR23D1E9PI22 279 aaPredicted RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 P2RY10O00398 339 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 PLOD2O00469 737 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 GAPDHSO14556 408 aaPredicted RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 CLIC2O15247 247 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 TBX10O75333 385 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 SLC22A3O75751 556 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 KRT36O76013 467 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 CELF2O95319 508 aaKnown RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 IGLV2-11P01706 119 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 PRSS1P07477 247 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 PRR23D2P0DMB1 279 aaPredicted RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 ERCC2P18074 760 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 JAK1P23458 1154 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 RAB28P51157 221 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 LBX1P52954 281 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 HNRNPKP61978 463 aaKnown RBP eCLIP2.99□□□□□ -1.93
RFC1-209ENST00000504974 CX3CL1P78423 397 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 DMP1Q13316 513 aaPredicted RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 ZRSR1Q15695 479 aaKnown RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 CRY2Q49AN0 593 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 KLHL26Q53HC5 615 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 TCP11X2Q5H9J9 407 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 CST9LP1Q5W188 147 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 FAM47EQ6ZV65 393 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 DET1Q7L5Y6 550 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 ARHGAP22Q7Z5H3 698 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 FOXP4Q8IVH2 680 aaPredicted RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 MFN1Q8IWA4 741 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 CPSF7Q8N684 471 aaKnown RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 OR1J1Q8NGS3 322 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 SCRN2Q96FV2 425 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 RHNO1Q9BSD3 238 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 NUP85Q9BW27 656 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 VN1R1Q9GZP7 353 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 PIH1D3Q9NQM4 214 aaKnown RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 OSGIN1Q9UJX0 560 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 ANAPC5Q9UJX4 755 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 LRRC37A3O60309 1634 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 CRB1P82279 1406 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 RGPD3A6NKT7 1758 aaPredicted RBP2.99□□□□□ -1.93
RFC1-209ENST00000504974 RGPD4Q7Z3J3 1758 aa2.99□□□□□ -1.93
RFC1-209ENST00000504974 FLT1P17948 1338 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 ZNF541Q9H0D2 1346 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 A0A1W2PPM1 405 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 FEZF1A0PJY2 475 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 FAM172BPA6NC97 362 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 A8MXE2 369 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 E9PI62 339 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 TRIM77I1YAP6 450 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 BMPR1BO00238 502 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 ACSL3O95573 720 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 PENKP01210 267 aaPredicted RBP2.98□□□□□ -1.93
RFC1-209ENST00000504974 FYNP06241 537 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 CCDC175P0C221 793 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 OR52Z1P0C646 297 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 SMIM18P0DKX4 95 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 MPZP25189 248 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 HSPA4P34932 840 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 CCR10P46092 362 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 MAPK12P53778 367 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 COG2Q14746 738 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 PSMD6Q15008 389 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 VWC2Q2TAL6 325 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 PHLDA2Q53GA4 152 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 WDR38Q5JTN6 314 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 ELFN2Q5R3F8 820 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 KRTAP5-11Q6L8G4 156 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 MFSD12Q6NUT3 480 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 C19orf48Q6RUI8 117 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 PPP1R21Q6ZMI0 780 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 CHST3Q7LGC8 479 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 TMPRSS11BQ86T26 416 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 ZNF554Q86TJ5 538 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 TMEM139Q8IV31 216 aa2.98□□□□□ -1.93
RFC1-209ENST00000504974 STPG4Q8N801 248 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms