RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TTC3P53804 2025 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 G3V2T6 193 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 SNNO75324 88 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 SERPINB7O75635 380 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 PGRP06401 933 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 OCM2P0CE71 109 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 OCMP0CE72 109 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 SRSF11Q05519 484 aaKnown RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 ZNHIT3Q15649 155 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 FAM78AQ5JUQ0 283 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 BNIPLQ7Z465 357 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 C3orf14Q9HBI5 128 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 RGS5O15539 181 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CCNDBP1O95273 360 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 PRPS1L1P21108 318 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 SERPINB10P48595 397 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 ZNF140P52738 457 aaPredicted RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 TYW3Q6IPR3 259 aaKnown RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CXorf57Q6NSI4 855 aaKnown RBP13.72□□□□□ -0.21
TCOF1-207ENST00000504761 HM13Q8TCT9 377 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 ZNF382Q96SR6 550 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 ABCG4Q9H172 646 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 SUFUQ9UMX1 484 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 FADS3Q9Y5Q0 445 aa13.72□□□□□ -0.21
TCOF1-207ENST00000504761 CXCR6O00574 342 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 PRDX3P30048 256 aaKnown RBP13.71□□□□□ -0.21
TCOF1-207ENST00000504761 AQP4P55087 323 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 ABRAXAS2Q15018 415 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 KDM1BQ8NB78 822 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 LRRC3Q9BY71 257 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 C20orf27Q9GZN8 174 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 SAMD4AQ9UPU9 718 aaKnown RBP13.71□□□□□ -0.21
TCOF1-207ENST00000504761 LYVE1Q9Y5Y7 322 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 TCRBV21S2A2A0A5A6 115 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 RHPN2P1A8MT19 583 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 SRPRAP08240 638 aaKnown RBP13.71□□□□□ -0.21
TCOF1-207ENST00000504761 RPL34P49207 117 aaKnown RBP13.71□□□□□ -0.21
TCOF1-207ENST00000504761 GSK3BP49841 420 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 DLG1Q12959 904 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 PCBP2Q15366 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
TCOF1-207ENST00000504761 SHHQ15465 462 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 EOGTQ5NDL2 527 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 CGB2Q6NT52 195 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 SETD9Q8NE22 299 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 TSPAN14Q8NG11 270 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 SLC7A6OSQ96CW6 309 aaPredicted RBP13.71□□□□□ -0.21
TCOF1-207ENST00000504761 VMP1Q96GC9 406 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 RASSF1Q9NS23 344 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 WBP1LQ9NX94 342 aa13.71□□□□□ -0.21
TCOF1-207ENST00000504761 A0A1W2PP18 115 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 A0A1W2PRB8 838 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 SERPINA1P01009 418 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 OPN1SWP03999 348 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 UQCRBP14927 111 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 FOXA1P55317 472 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 ADCY4Q8NFM4 1077 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 OR4K1Q8NGD4 311 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 FBXO27Q8NI29 283 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 ZNF607Q96SK3 696 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 CCDC106Q9BWC9 280 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 PCBD2Q9H0N5 130 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 USE1Q9NZ43 259 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 SLC9A8Q9Y2E8 581 aa13.71□□□□□ -0.22
TCOF1-207ENST00000504761 GLOD5A6NK44 160 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 CLIC1O00299 241 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 NDUFS4O43181 175 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 NTSR1P30989 418 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 RUNX1T1Q06455 604 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 EIF2B5Q13144 721 aaKnown RBP13.7□□□□□ -0.22
TCOF1-207ENST00000504761 ZNF605Q86T29 641 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 DCUN1D3Q8IWE4 304 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 FAM110BQ8TC76 370 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 SLC5A11Q8WWX8 675 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 RSPH9Q9H1X1 276 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-207ENST00000504761 A0A087WXM4 84 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 PDLIM1O00151 329 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 AP2A2O94973 939 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 ADH1BP00325 375 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 CXCL10P02778 98 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 POU2F1P14859 743 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 MAGEA3P43357 314 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 PTPN5P54829 565 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 TAS2R50P59544 299 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 GCNT6Q5T4J0 391 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 TANGO2Q6ICL3 276 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 EIF3MQ7L2H7 374 aaKnown RBP13.7□□□□□ -0.22
TCOF1-207ENST00000504761 VN1R5Q7Z5H4 357 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 KRTCAP2Q8N6L1 136 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 RORBQ92753 470 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 ZCCHC3Q9NUD5 404 aaKnown RBP13.7□□□□□ -0.22
TCOF1-207ENST00000504761 HSFX1Q9UBD0 423 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 GTF2A1LQ9UNN4 478 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 PRSS21Q9Y6M0 314 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 KIAA0355O15063 1070 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 TP73O15350 636 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 TPST2O60704 377 aa13.7□□□□□ -0.22
TCOF1-207ENST00000504761 ENO2P09104 434 aaPredicted RBP13.7□□□□□ -0.22
TCOF1-207ENST00000504761 PXNP49023 591 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms