RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 ULK4Q96C45 1275 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 ST6GAL2Q96JF0 529 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 RPRD1AQ96P16 312 aaPredicted RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 TINF2Q9BSI4 451 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 GPRC5BQ9NZH0 403 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 RHCGQ9UBD6 479 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 TRMT6Q9UJA5 497 aaKnown RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 MEIOCA2RUB1 952 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 GFRA2O00451 464 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 WBP4O75554 376 aaKnown RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 FDXRP22570 491 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 TACR1P25103 407 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 TNFSF8P32971 234 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 FEN1P39748 380 aaKnown RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 GPR15P49685 360 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF181Q2M3W8 571 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 TIGD5Q53EQ6 642 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 NADSYN1Q6IA69 706 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 FAM180BQ6P0A1 224 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 SUSD1Q6UWL2 747 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 BCDIN3DQ7Z5W3 292 aaKnown RBP7.43□□□□□ -1.22
NEDD9-208ENST00000504387 GPR142Q7Z601 462 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 AMIGO1Q86WK6 493 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 FAM20CQ8IXL6 584 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 SETD9Q8NE22 299 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 COQ8BQ96D53 544 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 TSPAN18Q96SJ8 248 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 MMP27Q9H306 513 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 ABCB8Q9NUT2 735 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 RLIMQ9NVW2 624 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 ST3GAL5Q9UNP4 418 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 HSPB11Q9Y547 144 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 HS3ST4Q9Y661 456 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 ANK1P16157 1881 aa7.43□□□□□ -1.22
NEDD9-208ENST00000504387 A0A0G2JMP0 313 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 A0A1W2PQ09 198 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 OR2A25A4D2G3 310 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 TEX28O15482 410 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 KERAO60938 352 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ALX3O95076 343 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 NUDT7P0C024 238 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 GRK4P32298 578 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 THPOP40225 353 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 HUNKP57058 714 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 GABARAPL2P60520 117 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 POU6F2P78424 691 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 FOXM1Q08050 763 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ST3GAL4Q11206 333 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ZNF235Q14590 738 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ACOX1Q15067 660 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 FAM187BQ17R55 369 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 SLC39A12Q504Y0 691 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 MFSD14CQ5VZR4 134 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 OR4F3Q6IEY1 312 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 KDELC1Q6UW63 502 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 PEX5LQ8IYB4 626 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ENTHD1Q8IYW4 607 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 OR6K2Q8NGY2 324 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 NPLOC4Q8TAT6 608 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ISG20Q96AZ6 181 aaKnown RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 CDKN2AIPNLQ96HQ2 116 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 PYURFQ96I23 114 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 UCK2Q9BZX2 261 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 DUSP21Q9H596 190 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 CATSPERBQ9H7T0 1116 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 AASDHPPTQ9NRN7 309 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ADARB2Q9NS39 739 aaKnown RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 TMEM184CQ9NVA4 438 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 FKBPLQ9UIM3 349 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 H3BQ06 376 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 CXCL11O14625 94 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 RPLP0P05388 317 aaKnown RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 PTPN2P17706 415 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 RENBPP51606 427 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 GALNT1Q10472 559 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 IL18R1Q13478 541 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ARHGEF7Q14155 803 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ZBTB6Q15916 424 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 BRMS1LQ5PSV4 323 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 ARMC12Q5T9G4 340 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 OR2T5Q6IEZ7 315 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 TTC23LQ6PF05 361 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 LPCAT1Q8NF37 534 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 OR2T29Q8NH02 315 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 KIAA1191Q96A73 305 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 NTAN1Q96AB6 310 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 SMARCD1Q96GM5 515 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 VPS35Q96QK1 796 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 CDCP1Q9H5V8 836 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 NMUR1Q9HB89 426 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 CCDC177Q9NQR7 707 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 LATS2Q9NRM7 1088 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 THUMPD1Q9NXG2 353 aaKnown RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 TBC1D24Q9ULP9 559 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 PHIPQ8WWQ0 1821 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 TANC1Q9C0D5 1861 aa7.42□□□□□ -1.22
NEDD9-208ENST00000504387 POLR2AP24928 1970 aaKnown RBP7.42□□□□□ -1.22
NEDD9-208ENST00000504387 A0A1B0GVC2 190 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms