RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CLCN7P51798 805 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC7A2P52569 658 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC26A5P58743 744 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ABATP80404 500 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 XIAPP98170 497 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 EPS8Q12929 822 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PRKAA1Q13131 559 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CDH18Q13634 790 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 FNDC3BQ53EP0 1204 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 KRTCAP3Q53RY4 240 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 RNASE12Q5GAN4 147 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PAGE2BQ5JRK9 111 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SPANXN2Q5MJ10 180 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PDZK1Q5T2W1 519 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 C6orf52Q5T4I8 152 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 MFSD5Q6N075 450 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 IL27RAQ6UWB1 636 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PRSS57Q6UWY2 283 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 IRF2BP2Q7Z5L9 587 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 LDB1Q86U70 411 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 KBTBD6Q86V97 674 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 EPHX4Q8IUS5 362 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC41A1Q8IVJ1 513 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ZC3H7AQ8IWR0 971 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 IZUMO1Q8IYV9 350 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 OFCC1Q8IZS5 231 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 STPG2Q8N412 459 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 LRRC18Q8N456 261 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 FBXO39Q8N4B4 442 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ARL14Q8N4G2 192 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CLHC1Q8NHS4 586 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SLC5A11Q8WWX8 675 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 NDRG1Q92597 394 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 HAS1Q92839 578 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ESAMQ96AP7 390 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 MED8Q96G25 268 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 BTBD9Q96Q07 612 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 B3GNT5Q9BYG0 378 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 CIPCQ9C0C6 399 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SPATC1LQ9H0A9 340 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PORCNQ9H237 461 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ST6GALNAC4Q9H4F1 302 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 PRDM12Q9H4Q4 367 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 NOL11Q9H8H0 719 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ZNF395Q9H8N7 513 aaPredicted RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 RGS18Q9NS28 235 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 DUS2Q9NX74 493 aaKnown RBP3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 NKIRAS2Q9NYR9 191 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 ERAP1Q9NZ08 941 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 COPG2Q9UBF2 871 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 EPHA6Q9UF33 1036 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 GPR52Q9Y2T5 361 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 KCNK7Q9Y2U2 307 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 AP1M2Q9Y6Q5 423 aa3.59□□□□□ -1.83
PCDH11X-208ENST00000504220 SZT2Q5T011 3432 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 AHCTF1Q8WYP5 2266 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 COL6A3P12111 3177 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A0A6YYK5 440 aaPredicted RBP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 CCDC85CA6NKD9 419 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF729A6NN14 1252 aaPredicted RBP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 UBXN8O00124 270 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ARVCFO00192 962 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 FSCN2O14926 492 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 GPRIN2O60269 458 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 HBP1O60381 514 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 RECQL5O94762 991 aaPredicted RBP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 MED26O95402 600 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ADH1CP00326 375 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 STSP08842 583 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 USP17L7P0C7H9 530 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 COX4I1P13073 169 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ANXA8P13928 327 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 INSRRP14616 1297 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF182P17025 639 aaPredicted RBP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 KDELR1P24390 212 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC15A1P46059 708 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 CAPZA2P47755 286 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 CXCR3P49682 368 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 HNMTP50135 292 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 TAS2R60P59551 318 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 PSME3P61289 254 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 COPZ1P61923 177 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 NFATC3Q12968 1075 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC14A1Q13336 389 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 PPIL2Q13356 520 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 IKBKEQ14164 716 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 DOC2AQ14183 400 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 LASP1Q14847 261 aaKnown RBP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM98BQ52LJ0 330 aaKnown RBP3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 FNBP1LQ5T0N5 605 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 MARC1Q5VT66 337 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ANXA8L1Q5VT79 327 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ANKS6Q68DC2 871 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF425Q6IV72 752 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 MZT2BQ6NZ67 158 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 GLB1LQ6UWU2 654 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 DHDDSQ86SQ9 333 aa3.59□□□□□ -1.84
PCDH11X-208ENST00000504220 GALNT10Q86SR1 603 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms