RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SLAMF7Q9NQ25 335 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ASNSD1Q9NWL6 643 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 GPR55Q9Y2T6 319 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF142P52746 1687 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 E7ENX8 843 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 H0YIN7 160 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 NRP2O60462 931 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SLC34A2O95436 690 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ALDH2P05091 517 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 HTR3AP46098 478 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SMSP52788 366 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 HTD2P86397 168 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SLAQ13239 276 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CLINT1Q14677 625 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 HNRNPA1L2Q32P51 320 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 GPR158Q5T848 1215 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 KLHDC7AQ5VTJ3 777 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PLCXD3Q63HM9 321 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 KIAA1324Q6UXG2 1013 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 LHFPL3Q86UP9 236 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 GPR180Q86V85 440 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 TMPRSS6Q8IU80 811 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 BOD1L2Q8IYS8 172 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ADGRF2Q8IZF7 708 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ZBTB34Q8NCN2 500 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CCDC107Q8WV48 283 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PABPC5Q96DU9 382 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CCDC17Q96LX7 622 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MAPKAP1Q9BPZ7 522 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 EXOSC4Q9NPD3 245 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 B3GNT2Q9NY97 397 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ADA2Q9NZK5 511 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 OPN4Q9UHM6 478 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 YARS2Q9Y2Z4 477 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PI4KAP2A4QPH2 592 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 OR14I1A6ND48 311 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MARCH11A6NNE9 402 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 M0R233 179 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SLC28A1O00337 649 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PRMT5O14744 637 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 UTS2O95399 124 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 F9P00740 461 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 RPLP1P05386 114 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CSN2P05814 226 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 THBS1P07996 1170 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 IMPDH1P20839 514 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 IGFBP5P24593 272 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 NDUFA8P51970 172 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 LSM3P62310 102 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MC2RQ01718 297 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 KCNH2Q12809 1159 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MTM1Q13496 603 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 OR4D1Q15615 310 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 FSCN1Q16658 493 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 KHDC1Q4VXA5 237 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 FGD3Q5JSP0 725 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 DCST2Q5T1A1 773 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ZNF385CQ66K41 422 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CRTC3Q6UUV7 619 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 LRRN1Q6UXK5 716 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 METTL16Q86W50 562 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 TCEAL8Q8IYN2 117 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ARL14Q8N4G2 192 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CELF2-AS1Q8N7Q2 184 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 KIAA0895Q8NCT3 520 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ZFP28Q8NHY6 868 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 THAP6Q8TBB0 222 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 MAGEB18Q96M61 343 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SMOQ99835 787 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PI4K2AQ9BTU6 479 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PTDSS2Q9BVG9 487 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 WNT8AQ9H1J5 351 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 NEUROG2Q9H2A3 272 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 TMEM248Q9NWD8 314 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SMPD3Q9NY59 655 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SNX12Q9UMY4 172 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ZFR2Q9UPR6 939 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 PIN4Q9Y237 131 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 DCDC2BA2VCK2 349 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 UBDO15205 165 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 RGS9O75916 674 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 CCNYL3P0C7X3 344 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 LCN1P31025 176 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 HIBADHP31937 336 aaKnown RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 HSD17B3P37058 310 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ITGA1P56199 1179 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ODF1Q14990 250 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 WDR72Q3MJ13 1102 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 ASPRV1Q53RT3 343 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 BROXQ5VW32 411 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 LEMD1Q68G75 181 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 LPCAT3Q6P1A2 487 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 LHFPL2Q6ZUX7 228 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 SIRT2Q8IXJ6 389 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 AMER2Q8N7J2 671 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 EXD3Q8N9H8 876 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 NCSTNQ92542 709 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 GCDHQ92947 438 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-204ENST00000504131 NXPE3Q969Y0 559 aa6.12□□□□□ -1.43
CLCN3-204ENST00000504131 C1QTNF7Q9BXJ2 289 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms