RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 NDRG2Q9UN36 371 aaKnown RBP16.15■□□□□ 0.18
PCDHA1-203ENST00000504120 KCNQ1P51787 676 aa16.15■□□□□ 0.18
PCDHA1-203ENST00000504120 CAMK1Q14012 370 aa16.15■□□□□ 0.18
PCDHA1-203ENST00000504120 C7orf61Q8IZ16 206 aa16.15■□□□□ 0.18
PCDHA1-203ENST00000504120 GEMIN6Q8WXD5 167 aaKnown RBP16.15■□□□□ 0.18
PCDHA1-203ENST00000504120 TP53INP1Q96A56 240 aa16.15■□□□□ 0.18
PCDHA1-203ENST00000504120 ANKRA2Q9H9E1 313 aa16.15■□□□□ 0.18
PCDHA1-203ENST00000504120 EFCAB9A8MZ26 197 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF879B4DU55 563 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 TLX3O43711 291 aaPredicted RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 PGLSO95336 258 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 S100A9P06702 114 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 DUOXA1Q1HG43 343 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 RELL1Q8IUW5 271 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 OAZ3Q9UMX2 235 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 DAPL1A0PJW8 107 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 LCHNA4D1U4 455 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 TGFB1P01137 390 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 CD2P06729 351 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 AZGP1P25311 298 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 CLCN7P51798 805 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 GPR17Q13304 367 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 SPATS1Q496A3 300 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ABHD13Q7L211 337 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 NUP54Q7Z3B4 507 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 PQLC3Q8N755 202 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 CHST4Q8NCG5 386 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 POLR2J2Q9GZM3 115 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ANKHQ9HCJ1 492 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 A0A0X1KG70 313 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ADH5P11766 374 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ZNF823P16415 610 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ACTR1BP42025 376 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ACTR1AP61163 376 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 DSC3Q14574 896 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 MS4A13Q5J8X5 152 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 NAPRTQ6XQN6 538 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 TPRG1Q6ZUI0 275 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 LRRTM4Q86VH4 590 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 FAM110BQ8TC76 370 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 DDX1Q92499 740 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 PIGKQ92643 395 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ADAP2Q9NPF8 381 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 PAK6Q9NQU5 681 aaPredicted RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 SIX4Q9UIU6 781 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 PRKAB1Q9Y478 270 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 SLC22A1O15245 554 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 SNX4O95219 450 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 F2P00734 622 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 C8BP07358 591 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ACP5P13686 325 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 CKMT2P17540 419 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 GSTM3P21266 225 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 ATP5A1P25705 553 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 RORCP51449 518 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 XKP51811 444 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 STC1P52823 247 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 RAB2AP61019 212 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 GANABQ14697 944 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 CRB2Q5IJ48 1285 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 RBM20Q5T481 1227 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 CNKSR3Q6P9H4 555 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 PIM3Q86V86 326 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 C1orf52Q8N6N3 182 aaKnown RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 FBXO15Q8NCQ5 510 aaPredicted RBP16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 KIAA1191Q96A73 305 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 MGME1Q9BQP7 344 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 SLC22A14Q9Y267 594 aa16.14■□□□□ 0.17
PCDHA1-203ENST00000504120 FAM172BPA6NC97 362 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 TMEM233B4DJY2 109 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 CDC7O00311 574 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 ALDH3A2P51648 485 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 TIGD6Q17RP2 521 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 OR4F3Q6IEY1 312 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 OGFOD2Q6N063 350 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 GOLGA7Q7Z5G4 137 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 CILP2Q8IUL8 1156 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 LGI4Q8N135 537 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 KLK6Q92876 244 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 FATE1Q969F0 183 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 COL21A1Q96P44 957 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 KCNS3Q9BQ31 491 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 ZBTB26Q9HCK0 441 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 POFUT2Q9Y2G5 429 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 TMA7Q9Y2S6 64 aaKnown RBP16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 ANXA2P2A6NMY6 339 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 TMEM150CB9EJG8 249 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 MANBAO00462 879 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 ANXA2P07355 339 aaKnown RBP16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 FMO3P31513 532 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 RBBP4Q09028 425 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 PLEKHG6Q3KR16 790 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 SLC8B1Q6J4K2 584 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 OR4F6Q8NGB9 312 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 CRELD1Q96HD1 420 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 CLCC1Q96S66 551 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 CARS2Q9HA77 564 aaKnown RBP16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 ACTR3BQ9P1U1 418 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 UPB1Q9UBR1 384 aa16.13■□□□□ 0.17
PCDHA1-203ENST00000504120 MED31Q9Y3C7 131 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms