RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 BIRC8Q96P09 236 aa21.15■□□□□ 0.98
LSM6-203ENST00000503982 TRIM56Q9BRZ2 755 aaKnown RBP21.15■□□□□ 0.98
LSM6-203ENST00000503982 ACAT2Q9BWD1 397 aa21.15■□□□□ 0.98
LSM6-203ENST00000503982 ABCF3Q9NUQ8 709 aa21.15■□□□□ 0.98
LSM6-203ENST00000503982 MAD1L1Q9Y6D9 718 aa21.15■□□□□ 0.98
LSM6-203ENST00000503982 NUP210LQ5VU65 1888 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 A0A0J9YVX5 310 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 SDR42E2A6NKP2 422 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 FKBP9O95302 570 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 EIF2S1P05198 315 aaKnown RBP21.14■□□□□ 0.97
LSM6-203ENST00000503982 ERVK-10P10266 1014 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 CMPK1P30085 196 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 COILP38432 576 aaPredicted RBP21.14■□□□□ 0.97
LSM6-203ENST00000503982 FNTAP49354 379 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 ANKRD20A4Q4UJ75 823 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 XAB2Q9HCS7 855 aaKnown RBP21.14■□□□□ 0.97
LSM6-203ENST00000503982 MLXIPLQ9NP71 852 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 FAM114A2Q9NRY5 505 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 P4HTMQ9NXG6 502 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 CDC23Q9UJX2 597 aa21.14■□□□□ 0.97
LSM6-203ENST00000503982 GOLGA6L10A0A0M3HER8 536 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 TARM1B6A8C7 271 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 DSCR3O14972 297 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 CEACAM4O75871 244 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 USP1O94782 785 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 SYF2O95926 243 aaKnown RBP21.13■□□□□ 0.97
LSM6-203ENST00000503982 CATP04040 527 aaKnown RBP21.13■□□□□ 0.97
LSM6-203ENST00000503982 RPA3P35244 121 aaPredicted RBP21.13■□□□□ 0.97
LSM6-203ENST00000503982 KLHL38Q2WGJ6 581 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 FAM214AQ32MH5 1076 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 TTLL9Q3SXZ7 439 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 ACSBG2Q5FVE4 666 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 MRPL14Q6P1L8 145 aaKnown RBP21.13■□□□□ 0.97
LSM6-203ENST00000503982 CAND1Q86VP6 1230 aaKnown RBP21.13■□□□□ 0.97
LSM6-203ENST00000503982 CILP2Q8IUL8 1156 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 OR9A1PQ8NGU1 263 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 GRK7Q8WTQ7 553 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 FBXO6Q9NRD1 293 aaPredicted RBP21.13■□□□□ 0.97
LSM6-203ENST00000503982 INTS10Q9NVR2 710 aaKnown RBP21.13■□□□□ 0.97
LSM6-203ENST00000503982 DOPEY2Q9Y3R5 2298 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 PCSK5Q92824 1860 aa21.13■□□□□ 0.97
LSM6-203ENST00000503982 MAGEB16A2A368 324 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 KIF2AO00139 706 aaPredicted RBP21.12■□□□□ 0.97
LSM6-203ENST00000503982 PHF2O75151 1096 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 CNOT3O75175 753 aaKnown RBP21.12■□□□□ 0.97
LSM6-203ENST00000503982 F7P08709 466 aaPredicted RBP21.12■□□□□ 0.97
LSM6-203ENST00000503982 MLNP12872 115 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 FASTKQ14296 549 aaKnown RBP21.12■□□□□ 0.97
LSM6-203ENST00000503982 DCAF10Q5QP82 559 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 WASHC2DQ5SRD0 308 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 VWA5B1Q5TIE3 1220 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 YOD1Q5VVQ6 348 aaPredicted RBP21.12■□□□□ 0.97
LSM6-203ENST00000503982 CENPUQ71F23 418 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 HPS6Q86YV9 775 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 GALNT16Q8N428 558 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 OR2L3Q8NG85 312 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.12■□□□□ 0.97
LSM6-203ENST00000503982 SLCO2A1Q92959 643 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 SERPINB12Q96P63 405 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 C20orf96Q9NUD7 363 aaPredicted RBP21.12■□□□□ 0.97
LSM6-203ENST00000503982 GALPQ9UBC7 116 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 ZC3H7BQ9UGR2 993 aaKnown RBP21.12■□□□□ 0.97
LSM6-203ENST00000503982 MAU2Q9Y6X3 613 aa21.12■□□□□ 0.97
LSM6-203ENST00000503982 HECTD1Q9ULT8 2610 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 FAM237BA0A1B0GVD1 139 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 KLHL41O60662 606 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 ALPPP05187 535 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 ATP5DP30049 168 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 CASQ1P31415 396 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 MAGEA6P43360 314 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 OR1D4P47884 311 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 CTBP1Q13363 440 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 CUL1Q13616 776 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 NAA25Q14CX7 972 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 PPP1R7Q15435 360 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 ARMC3Q5W041 872 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 JMJD6Q6NYC1 403 aaPredicted RBP21.11■□□□□ 0.97
LSM6-203ENST00000503982 SUSD1Q6UWL2 747 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 SHISA6Q6ZSJ9 500 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 MCUQ8NE86 351 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 COL26A1Q96A83 441 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 FKBP10Q96AY3 582 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 SOX17Q9H6I2 414 aaPredicted RBP21.11■□□□□ 0.97
LSM6-203ENST00000503982 MRPS30Q9NP92 439 aaKnown RBP21.11■□□□□ 0.97
LSM6-203ENST00000503982 ATP13A2Q9NQ11 1180 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 ANKMY1Q9P2S6 941 aa21.11■□□□□ 0.97
LSM6-203ENST00000503982 ZNF839A8K0R7 811 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 ARHGEF33A8MVX0 844 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 PRICKLE3O43900 615 aaPredicted RBP21.1■□□□□ 0.97
LSM6-203ENST00000503982 SRPX2O60687 465 aaPredicted RBP21.1■□□□□ 0.97
LSM6-203ENST00000503982 CTSVO60911 334 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 MATN4O95460 622 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 UMODP07911 640 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 GNLYP22749 145 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 ITGA3P26006 1051 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 CD97P48960 835 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 ADARP55265 1226 aaKnown RBP21.1■□□□□ 0.97
LSM6-203ENST00000503982 RBBP7Q16576 425 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 LONRF1Q17RB8 773 aa21.1■□□□□ 0.97
LSM6-203ENST00000503982 IRAK1BP1Q5VVH5 260 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms