RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TTC29Q8NA56 475 aaPredicted RBP11.47□□□□□ -0.57
MED28-203ENST00000503945 CLEC1AQ8NC01 280 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 OR9A1PQ8NGU1 263 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 HMGCLL1Q8TB92 370 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 GRK7Q8WTQ7 553 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 FAM136AQ96C01 138 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 UTP6Q9NYH9 597 aaKnown RBP11.47□□□□□ -0.57
MED28-203ENST00000503945 GPR83Q9NYM4 423 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 PLEKHB1Q9UF11 243 aaPredicted RBP11.47□□□□□ -0.57
MED28-203ENST00000503945 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 MAD1L1Q9Y6D9 718 aa11.47□□□□□ -0.57
MED28-203ENST00000503945 GOLGA6L10A0A0M3HER8 536 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 HYKKA2RU49 373 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 PGRMC1O00264 195 aaKnown RBP11.46□□□□□ -0.57
MED28-203ENST00000503945 ZBTB14O43829 449 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 AGFG2O95081 481 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 ALBP02768 609 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 ATP5DP30049 168 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CMPK1P30085 196 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 BDKRB1P46663 353 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CTBP1Q13363 440 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 ATP1A4Q13733 1029 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 SLC9A5Q14940 896 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 NAA25Q14CX7 972 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CYP1B1Q16678 543 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CYP2A13Q16696 494 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 KLHL38Q2WGJ6 581 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 TTLL9Q3SXZ7 439 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CCSMST1Q4G0I0 132 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 FHL5Q5TD97 284 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 ANKRD22Q5VYY1 191 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 MRPL14Q6P1L8 145 aaKnown RBP11.46□□□□□ -0.57
MED28-203ENST00000503945 FBXO42Q6P3S6 717 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CENPUQ71F23 418 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 LMNTD2Q8IXW0 634 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 GALNT11Q8NCW6 608 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 OR2L3Q8NG85 312 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 OR2A1Q8NGT9 310 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CPT1CQ8TCG5 803 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CALML6Q8TD86 181 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 ACTRT1Q8TDG2 376 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 SMPDL3AQ92484 453 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 VPS50Q96JG6 964 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 MIPEPQ99797 713 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 SLAMF7Q9NQ25 335 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 FAM114A2Q9NRY5 505 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 CUTCQ9NTM9 273 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 P4HTMQ9NXG6 502 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 SPATA7Q9P0W8 599 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 C5AR2Q9P296 337 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 KLHL42Q9P2K6 505 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 GALPQ9UBC7 116 aa11.46□□□□□ -0.57
MED28-203ENST00000503945 ZC3H7BQ9UGR2 993 aaKnown RBP11.46□□□□□ -0.57
MED28-203ENST00000503945 TSR3Q9UJK0 312 aaKnown RBP11.46□□□□□ -0.57
MED28-203ENST00000503945 CCDC88CQ9P219 2028 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 A0A0J9YVX5 310 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 A0A1B0GX78 115 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 ZNF839A8K0R7 811 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 DSCR3O14972 297 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 KIF5CO60282 957 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 SEMA7AO75326 666 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 USP1O94782 785 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 ONECUT2O95948 504 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 CATP04040 527 aaKnown RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 ALPPP05187 535 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 EIF2S1P05198 315 aaKnown RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 ITGAXP20702 1163 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 VARSP26640 1264 aaKnown RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 RPA3P35244 121 aaPredicted RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 VSX2P58304 361 aaPredicted RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 TSTA3Q13630 321 aaPredicted RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 ARHGAP19Q14CB8 494 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 PPP1R7Q15435 360 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 LONRF1Q17RB8 773 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 NADK2Q4G0N4 442 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 ACSBG2Q5FVE4 666 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 DCAF10Q5QP82 559 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 ZNF470Q6ECI4 717 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 JMJD6Q6NYC1 403 aaPredicted RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 NEK10Q6ZWH5 1172 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 MRGPREQ86SM8 312 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 REXO1L1PQ8IX06 675 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 GALNT16Q8N428 558 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 GABPB2Q8TAK5 448 aaPredicted RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 COG1Q8WTW3 980 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 INPP5DQ92835 1189 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 ZNF669Q96BR6 464 aaPredicted RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 SERPINB12Q96P63 405 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 OSBPL9Q96SU4 736 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 SMAD5Q99717 465 aaKnown RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 NUDT9Q9BW91 350 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 ACAT2Q9BWD1 397 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 MFRPQ9BY79 579 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 WDR54Q9H977 334 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 MRPS30Q9NP92 439 aaKnown RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 C20orf96Q9NUD7 363 aaPredicted RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 RUVBL2Q9Y230 463 aaKnown RBP11.45□□□□□ -0.58
MED28-203ENST00000503945 NEU2Q9Y3R4 380 aa11.45□□□□□ -0.58
MED28-203ENST00000503945 MAP4K5Q9Y4K4 846 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms