RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 PPP3R2Q96LZ3 170 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 PKP2Q99959 881 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 EBF3Q9H4W6 596 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 SLC32A1Q9H598 525 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 C8orf33Q9H7E9 229 aaPredicted RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 HPF1Q9NWY4 346 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 CMTM6Q9NX76 183 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 MALT1Q9UDY8 824 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 LEF1Q9UJU2 399 aaPredicted RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 DTNAQ9Y4J8 743 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 TCRBV3S1A0A5B6 114 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 SLC28A1O00337 649 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 SLC16A5O15375 505 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 RGS14O43566 566 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 HSD17B1P14061 328 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 SLC6A11P48066 632 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 IL1RL1Q01638 556 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 MESP2Q0VG99 397 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 GNA13Q14344 377 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 TIGD2Q4W5G0 525 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 PAGE3Q5JUK9 113 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 IL23RQ5VWK5 629 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 CYP20A1Q6UW02 462 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 LRRC70Q7Z2Q7 622 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 ZFAND4Q86XD8 727 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 DHFR2Q86XF0 187 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 NPAS3Q8IXF0 933 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 ZNF619Q8N2I2 560 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 PRR7Q8TB68 274 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 BPIFB1Q8TDL5 484 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 ELMO1Q92556 727 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 NXPE3Q969Y0 559 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 COL26A1Q96A83 441 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 DUS3LQ96G46 650 aaKnown RBP11.27□□□□□ -0.6
USP46-204ENST00000503060 ZFYVE19Q96K21 471 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 SLC29A3Q9BZD2 475 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 OBP2AQ9NY56 170 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 KLQ9UEF7 1012 aa11.27□□□□□ -0.6
USP46-204ENST00000503060 POLR3HQ9Y535 204 aaPredicted RBP11.27□□□□□ -0.6
USP46-204ENST00000503060 GFYI3L273 518 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 MANBAO00462 879 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 KPNA3O00505 521 aaPredicted RBP11.27□□□□□ -0.61
USP46-204ENST00000503060 NFATC1O95644 943 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 FTH1P02794 183 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 HIST1H2AGP0C0S8 130 aaPredicted RBP11.27□□□□□ -0.61
USP46-204ENST00000503060 G6PDP11413 515 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 EPORP19235 508 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 HIST1H2ADP20671 130 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 ERVK-21P61565 698 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 RFTN2Q52LD8 501 aaPredicted RBP11.27□□□□□ -0.61
USP46-204ENST00000503060 KRBOX4Q5JUW0 171 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 RARS2Q5T160 578 aaKnown RBP11.27□□□□□ -0.61
USP46-204ENST00000503060 ZNF648Q5T619 568 aaPredicted RBP11.27□□□□□ -0.61
USP46-204ENST00000503060 CYP2R1Q6VVX0 501 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 LIPIQ6XZB0 460 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 BTN2A2Q8WVV5 523 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 HIST1H2AHQ96KK5 128 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 PPM1MQ96MI6 270 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 NR1H4Q96RI1 486 aaPredicted RBP11.27□□□□□ -0.61
USP46-204ENST00000503060 HIST1H2AJQ99878 128 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 H2AFJQ9BTM1 129 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 ACTL8Q9H568 366 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 AP4S1Q9Y587 144 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 PCDHA9Q9Y5H5 950 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 GMEB1Q9Y692 573 aa11.27□□□□□ -0.61
USP46-204ENST00000503060 ANKRD28O15084 1053 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 TSC22D2O75157 780 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 ULK1O75385 1050 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 PAPLNO95428 1278 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 CLDN9O95484 217 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 ELFN1P0C7U0 828 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 CDK4P11802 303 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 SLC2A4P14672 509 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 CYP2A7P20853 494 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 ATP6V1B2P21281 511 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 EVI2BP34910 448 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 SLC6A12P48065 614 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 YBX1P67809 324 aaKnown RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 ACOX1Q15067 660 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 ZXDCQ2QGD7 858 aaPredicted RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 SMU1Q2TAY7 513 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 GAB4Q2WGN9 574 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 SPATS1Q496A3 300 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 HABP4Q5JVS0 413 aaKnown RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 LDLRAP1Q5SW96 308 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 TRIM46Q7Z4K8 759 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 BEND7Q8N7W2 519 aaPredicted RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 TMEM102Q8N9M5 508 aaPredicted RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 CATSPER1Q8NEC5 780 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 ADCY4Q8NFM4 1077 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 ASZ1Q8WWH4 475 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 SMARCD2Q92925 531 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 USP7Q93009 1102 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 GLYATL1Q969I3 302 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 ZUFSPQ96AP4 578 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 TMEM125Q96AQ2 219 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 VPS35Q96QK1 796 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 SMAD5Q99717 465 aaKnown RBP11.26□□□□□ -0.61
USP46-204ENST00000503060 ACTR8Q9H981 624 aa11.26□□□□□ -0.61
USP46-204ENST00000503060 FARSBQ9NSD9 589 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms