RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 TCRBV3S1A0A5B6 114 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 A8MV72 311 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 K7ERQ8 282 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 AREL1O15033 823 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 PDPK1O15530 556 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 NDUFS6O75380 124 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CCNKO75909 580 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 DNAJB5O75953 348 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 STC2O76061 302 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SEC24AO95486 1093 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CD160O95971 181 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 MT-ND1P03886 318 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 FGF4P08620 206 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ALPIP09923 528 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 MTHFD1P11586 935 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 POU2F1P14859 743 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CTPS1P17812 591 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SLC6A2P23975 617 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 OXTRP30559 389 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 GKP32189 559 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SEPHS1P49903 392 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CDH4P55283 916 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 LSM3P62310 102 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 PLIN5Q00G26 463 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 RAD51Q06609 339 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ZNF177Q13360 481 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SQSTM1Q13501 440 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SELPLGQ14242 412 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ZMYND11Q15326 602 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CTSL3PQ5NE16 218 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ATXN7L2Q5T6C5 722 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 RNF219Q5W0B1 726 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ANKS6Q68DC2 871 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 LHX8Q68G74 356 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 GTF2IRD2BQ6EKJ0 949 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ZBTB49Q6ZSB9 765 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 TMCO2Q7Z6W1 182 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SYVN1Q86TM6 617 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 GTF2IRD2Q86UP8 949 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 MIER2Q8N344 545 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 MFSD4AQ8N468 514 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CDYL2Q8N8U2 506 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 OR2T11Q8NH01 316 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 LRRC20Q8TCA0 184 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CD99L2Q8TCZ2 262 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CD200R1Q8TD46 325 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ZFP90Q8TF47 636 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ST8SIA2Q92186 375 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 FBXL20Q96IG2 436 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CEP19Q96LK0 163 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 TMEM74Q96NL1 305 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SAMD11Q96NU1 681 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 OPALINQ96PE5 141 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SLC22A12Q96S37 553 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CHID1Q9BWS9 393 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 PITHD1Q9GZP4 211 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 DERL2Q9GZP9 239 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 HPS4Q9NQG7 708 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SDR39U1Q9NRG7 319 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 INTS7Q9NVH2 962 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 TOR4AQ9NXH8 423 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 TNFRSF10DQ9UBN6 386 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 WARS2Q9UGM6 360 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 EIF2B4Q9UI10 523 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CNOT6Q9ULM6 557 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 USP22Q9UPT9 525 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 FCF1Q9Y324 198 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 NDUFAF1Q9Y375 327 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CAB39Q9Y376 341 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 V9GYQ6 96 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CHD5Q8TDI0 1954 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 VCANP13611 3396 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 C2orf72A6NCS6 295 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 E5RI56 91 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 PLK4O00444 970 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SOCS2O14508 198 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 STX7O15400 261 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 HTRA2O43464 458 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 KDELR3O43731 214 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 MAN1A2O60476 641 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 GREM1O60565 184 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CLDN11O75508 207 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 OR4F21O95013 312 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 F11P03951 625 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 KRT8P05787 483 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 PKMP14618 531 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SELPP16109 830 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 NCK1P16333 377 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 HMGA1P17096 107 aaKnown RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 LBPP18428 481 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ITGB6P18564 788 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 LPOP22079 712 aaPredicted RBP5.04□□□□□ -1.6
CLDND1-208ENST00000503004 ALDH4A1P30038 563 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 UQCRC1P31930 480 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CA5AP35218 305 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 SOX9P48436 509 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 BLVRAP53004 296 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 CCL23P55773 120 aa5.04□□□□□ -1.6
CLDND1-208ENST00000503004 UFM1P61960 85 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms