RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 OR7D4Q8NG98 312 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 OR4D9Q8NGE8 314 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 RFWD2Q8NHY2 731 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 PIWIL2Q8TC59 973 aaKnown RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 SLC26A7Q8TE54 656 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 SLC44A1Q8WWI5 657 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 PATE1Q8WXA2 126 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 RXFP2Q8WXD0 754 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 NTAN1Q96AB6 310 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 VOPP1Q96AW1 172 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 DUS3LQ96G46 650 aaKnown RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 CNDP1Q96KN2 507 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 ZNF641Q96N77 438 aaPredicted RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 KLHL32Q96NJ5 620 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 TEFMQ96QE5 360 aaKnown RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 SLC38A3Q99624 504 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 C11orf70Q9BRQ4 267 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 GPATCH1Q9BRR8 931 aaKnown RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 CNPY3Q9BT09 278 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 APOOQ9BUR5 198 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 C2orf49Q9BVC5 232 aaPredicted RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 C1QTNF2Q9BXJ5 285 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 ANKRD60Q9BZ19 345 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 GRIP2Q9C0E4 1043 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 B3GNT4Q9C0J1 378 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 ING2Q9H160 280 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 TRIT1Q9H3H1 467 aaKnown RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 RETREG1Q9H6L5 497 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 TMEM165Q9HC07 324 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 MRM3Q9HC36 420 aaKnown RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 HMG20AQ9NP66 347 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 MLXIPLQ9NP71 852 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 SEPT11Q9NVA2 429 aaKnown RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 HECAQ9UBI9 543 aaPredicted RBP5.05□□□□□ -1.6
HTT-202ENST00000502820 SH3BGRL2Q9UJC5 107 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 DCTN4Q9UJW0 460 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 POMPQ9Y244 141 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 IFT52Q9Y366 437 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 ZNF451Q9Y4E5 1061 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 ACTL7AQ9Y615 435 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 NBASA2RRP1 2371 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 POLQO75417 2590 aa5.05□□□□□ -1.6
HTT-202ENST00000502820 CELSR2Q9HCU4 2923 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 LRBAP50851 2863 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 MN1Q10571 1320 aaPredicted RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 CSMD2Q7Z408 3487 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 A8MX80 341 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 POC1B-GALNT4F8VUJ3 575 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 CACNB4O00305 520 aaPredicted RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 PRICKLE3O43900 615 aaPredicted RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 LRIG2O94898 1065 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 PGM3O95394 542 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 CRTAMO95727 393 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 CALB1P05937 261 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 ENO1P06733 434 aaKnown RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 THRAP10827 490 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 KRT3P12035 628 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 PNLIPP16233 465 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 ZNF28P17035 718 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 RHOQP17081 205 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 JAK1P23458 1154 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 NFKBIAP25963 317 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 AK4P27144 223 aaPredicted RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 OR1E1P30953 314 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 SDC4P31431 198 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 RFC1P35251 1148 aaPredicted RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 ACVRL1P37023 503 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 NSFP46459 744 aaKnown RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 GNPDA1P46926 289 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 MAPKAPK2P49137 400 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 SEPHS1P49903 392 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 SERPINH1P50454 418 aaKnown RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 ART1P52961 327 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 TMBIM6P55061 237 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 KRTAP10-9P60411 292 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 NAA20P61599 178 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 TUBA1BP68363 451 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 ARF5P84085 180 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 TMPRSS15P98073 1019 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 MC2RQ01718 297 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 PDIA2Q13087 525 aaKnown RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 NFATC2Q13469 925 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 TRA2AQ13595 282 aaKnown RBP eCLIP5.04□□□□□ -1.6
HTT-202ENST00000502820 CCNIQ14094 377 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 NFATC4Q14934 902 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 TLR1Q15399 786 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 MAPRE2Q15555 327 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 TGFBIQ15582 683 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 PLEKHN1Q494U1 663 aaPredicted RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 CARD16Q5EG05 197 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 HP1BP3Q5SSJ5 553 aaPredicted RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 TMEM71Q6P5X7 295 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 FAM199XQ6PEV8 388 aaPredicted RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 C16orf87Q6PH81 154 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 TUBA1AQ71U36 451 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 FKBP9P1Q75LS8 142 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 NANOGNBQ7Z5D8 188 aa5.04□□□□□ -1.6
HTT-202ENST00000502820 CHERPQ8IWX8 916 aaKnown RBP5.04□□□□□ -1.6
HTT-202ENST00000502820 PLPP6Q8IY26 295 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms