RNA–Protein interactions for RNA: ENST00000502548.5

RACK1-202, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,090 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-202ENST00000502548 FCRL6Q6DN72 434 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 C8orf74Q6P047 294 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 FAM199XQ6PEV8 388 aaPredicted RBP12.47□□□□□ -0.41
RACK1-202ENST00000502548 PCSK4Q6UW60 755 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 ZDHHC24Q6UX98 284 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 ZC3HC1Q86WB0 502 aaKnown RBP12.47□□□□□ -0.41
RACK1-202ENST00000502548 DSELQ8IZU8 1212 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 MYO1HQ8N1T3 1032 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 MMGT1Q8N4V1 131 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 KIF18AQ8NI77 898 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 CT55Q8WUE5 264 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 ZNF480Q8WV37 535 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 STARD8Q92502 1023 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 SEC14L1Q92503 715 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 CDKL2Q92772 493 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 PDLIM5Q96HC4 596 aaKnown RBP12.47□□□□□ -0.41
RACK1-202ENST00000502548 CCDC138Q96M89 665 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 CATSPER2Q96P56 530 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 DPH2Q9BQC3 489 aaPredicted RBP12.47□□□□□ -0.41
RACK1-202ENST00000502548 PARVBQ9HBI1 364 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 PCMTD2Q9NV79 361 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 PSAT1Q9Y617 370 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 ADAMTS20P59510 1910 aa12.47□□□□□ -0.41
RACK1-202ENST00000502548 EIF4E1BA6NMX2 242 aaKnown RBP12.46□□□□□ -0.41
RACK1-202ENST00000502548 AGXTP21549 392 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 PSMB5P28074 263 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 CMPK1P30085 196 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 RPA3P35244 121 aaPredicted RBP12.46□□□□□ -0.41
RACK1-202ENST00000502548 MAGEA4P43358 317 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 RPS15P62841 145 aaKnown RBP12.46□□□□□ -0.41
RACK1-202ENST00000502548 PRDX1Q06830 199 aaKnown RBP12.46□□□□□ -0.41
RACK1-202ENST00000502548 NAA25Q14CX7 972 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 TBR1Q16650 682 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 DEFB110Q30KQ9 67 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 RHBDD2Q6NTF9 364 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 SUSD1Q6UWL2 747 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 CAPN12Q6ZSI9 719 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 SYTL1Q8IYJ3 562 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 DLG3Q92796 817 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 EXTL1Q92935 676 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 LINGO1Q96FE5 620 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 OLFM1Q99784 485 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 MIPEPQ99797 713 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 ACAT2Q9BWD1 397 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 CHST8Q9H2A9 424 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 RHOJQ9H4E5 214 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 SMYD2Q9NRG4 433 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 PDE10AQ9Y233 779 aa12.46□□□□□ -0.41
RACK1-202ENST00000502548 FARSAQ9Y285 508 aaKnown RBP12.46□□□□□ -0.41
RACK1-202ENST00000502548 PTPRQQ9UMZ3 2332 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 TCRBV9S1A1TA0A576 114 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 CTAGE15A4D2H0 777 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 ZSCAN9O15535 394 aaPredicted RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 CREG1O75629 220 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 CCNDBP1O95273 360 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 TSPAN12O95859 305 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 RAB40ALP0C0E4 278 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 HIST1H2AGP0C0S8 130 aaPredicted RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 CTAGE8P0CG41 777 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 HIST1H2ADP20671 130 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 PTPN4P29074 926 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 GPX6P59796 221 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 ABATP80404 500 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 GUCY2DQ02846 1103 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 SP140Q13342 867 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 TSTA3Q13630 321 aaPredicted RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 LINC00303Q3SY05 128 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 GLE1Q53GS7 698 aaKnown RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 TCTE1Q5JU00 501 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 C16orf46Q6P387 395 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 FBXO42Q6P3S6 717 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 CTAGE6Q86UF2 777 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 CCDC25Q86WR0 208 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 CTAGE4Q8IX94 777 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 LRRC56Q8IYG6 542 aaPredicted RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 ZNF655Q8N720 491 aaPredicted RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 VPS39Q96JC1 886 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 HIST1H2AHQ96KK5 128 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 CPNE1Q99829 537 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 HIST1H2AJQ99878 128 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 MCMBPQ9BTE3 642 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 H2AFJQ9BTM1 129 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 DPH7Q9BTV6 452 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 NDC1Q9BTX1 674 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 NLNQ9BYT8 704 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 TRIM54Q9BYV2 358 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 LRRC4CQ9HCJ2 640 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 MRPS30Q9NP92 439 aaKnown RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 ENAMQ9NRM1 1142 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 IRAK4Q9NWZ3 460 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 UTP6Q9NYH9 597 aaKnown RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 TXNDC16Q9P2K2 825 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 ADAMTS6Q9UKP5 1117 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 MRPS18BQ9Y676 258 aaKnown RBP12.45□□□□□ -0.42
RACK1-202ENST00000502548 CFAP47Q6ZTR5 3102 aa12.45□□□□□ -0.42
RACK1-202ENST00000502548 FAM95CA0A1B0GW59 222 aa12.44□□□□□ -0.42
RACK1-202ENST00000502548 ESYT3A0FGR9 886 aa12.44□□□□□ -0.42
RACK1-202ENST00000502548 OR2A25A4D2G3 310 aa12.44□□□□□ -0.42
RACK1-202ENST00000502548 FAM159BA6NKW6 160 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms