RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 IFNB1P01574 187 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 AOAHP28039 575 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 GCGRP47871 477 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 OR1D4P47884 311 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 CARSP49589 748 aaKnown RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 VSX2P58304 361 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 OCA2Q04671 838 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 ACVR1Q04771 509 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 CDC16Q13042 620 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 ZNF169Q14929 603 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 TLR1Q15399 786 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 WASHC2DQ5SRD0 308 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 B3GNTL1Q67FW5 361 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 FCRL6Q6DN72 434 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 IGFL2Q6UWQ7 119 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 ISLR2Q6UXK2 745 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 RAD9BQ6WBX8 426 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 SHISA6Q6ZSJ9 500 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 TMEM151BQ8IW70 566 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 SLC34A3Q8N130 599 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 LMNTD1Q8N9Z9 388 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 ACRBPQ8NEB7 543 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 PPHLN1Q8NEY8 458 aaKnown RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 MAGEC3Q8TD91 643 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 GRHL3Q8TE85 626 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 THOC3Q96J01 351 aaKnown RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 CNDP1Q96KN2 507 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 FOPNLQ96NB1 174 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 IL17FQ96PD4 163 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 PANX3Q96QZ0 392 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 LMF1Q96S06 567 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 SPSB2Q99619 263 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 MENTQ9BUN1 341 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 SOX17Q9H6I2 414 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 ZNF304Q9HCX3 659 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 RAB6BQ9NRW1 208 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 CATSPERZQ9NTU4 200 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 TTC7AQ9ULT0 858 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 PACSIN2Q9UNF0 486 aaPredicted RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 NOVA2Q9UNW9 492 aaKnown RBP11.52□□□□□ -0.57
CNOT4-211ENST00000498534 HS3ST3B1Q9Y662 390 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 FAM169AQ9Y6X4 670 aa11.52□□□□□ -0.57
CNOT4-211ENST00000498534 DOCK10Q96BY6 2186 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 DIDO1Q9BTC0 2240 aaKnown RBP11.51□□□□□ -0.57
CNOT4-211ENST00000498534 HYKKA2RU49 373 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 FITM1A5D6W6 292 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 CD3EAPO15446 510 aaKnown RBP11.51□□□□□ -0.57
CNOT4-211ENST00000498534 LRRTM2O43300 516 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 NDUFS3O75489 264 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 FTCDO95954 541 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 APRTP07741 180 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 EDN3P14138 238 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 MCM3P25205 808 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 CCNFP41002 786 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 GRIA1P42261 906 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 TSFMP43897 325 aaKnown RBP11.51□□□□□ -0.57
CNOT4-211ENST00000498534 ZNF75DP51815 510 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 GRB7Q14451 532 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 PCID2Q5JVF3 399 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 PRMT9Q6P2P2 845 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 ZNF534Q76KX8 674 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 OTOAQ7RTW8 1153 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 LDB1Q86U70 411 aaPredicted RBP11.51□□□□□ -0.57
CNOT4-211ENST00000498534 KRT222Q8N1A0 295 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 CCDC89Q8N998 374 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 OR11G2Q8NGC1 345 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 FAR1Q8WVX9 515 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 ATG4AQ8WYN0 398 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 ZNF778Q96MU6 729 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 ZNF285Q96NJ3 590 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 BAG1Q99933 345 aaPredicted RBP11.51□□□□□ -0.57
CNOT4-211ENST00000498534 CRB3Q9BUF7 120 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 ENAMQ9NRM1 1142 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 ZC3H7BQ9UGR2 993 aaKnown RBP11.51□□□□□ -0.57
CNOT4-211ENST00000498534 OSGIN2Q9Y236 505 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 TCAF1Q9Y4C2 921 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 MAU2Q9Y6X3 613 aa11.51□□□□□ -0.57
CNOT4-211ENST00000498534 VSTM2BA6NLU5 285 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 AP3B1O00203 1094 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 LIASO43766 372 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 PRICKLE3O43900 615 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-211ENST00000498534 ALOX12BO75342 701 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 C1orf105O95561 183 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 EIF2S1P05198 315 aaKnown RBP11.5□□□□□ -0.57
CNOT4-211ENST00000498534 ACPPP15309 386 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 SEMA3AQ14563 771 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 NAA25Q14CX7 972 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 SEL1L2Q5TEA6 688 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 LINC00696Q6ZRV3 163 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 COX15Q7KZN9 410 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 SDCCAG8Q86SQ7 713 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-211ENST00000498534 LRRC6Q86X45 466 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 KBTBD2Q8IY47 623 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 METTL27Q8N6F8 245 aaPredicted RBP11.5□□□□□ -0.57
CNOT4-211ENST00000498534 MIEF2Q96C03 454 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 HES6Q96HZ4 224 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 MIPEPQ99797 713 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 CHRAC1Q9NRG0 131 aa11.5□□□□□ -0.57
CNOT4-211ENST00000498534 CTSFQ9UBX1 484 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms