RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 GPR180Q86V85 440 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.64□□□□□ -1.67
SSR3-209ENST00000498205 CNPY4Q8N129 248 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 MUC20Q8N307 709 aaPredicted RBP4.64□□□□□ -1.67
SSR3-209ENST00000498205 PCDH20Q8N6Y1 951 aaKnown RBP4.64□□□□□ -1.67
SSR3-209ENST00000498205 ZNF441Q8N8Z8 693 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 LMNTD1Q8N9Z9 388 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 TEX19Q8NA77 164 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 CCDC26Q8TAB7 109 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 TAF4BQ92750 862 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 HDAC2Q92769 488 aaKnown RBP4.64□□□□□ -1.67
SSR3-209ENST00000498205 SLCO2A1Q92959 643 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 PIGTQ969N2 578 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 IGSF8Q969P0 613 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 SLC35C1Q96A29 364 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 MOAP1Q96BY2 351 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 ORAI1Q96D31 301 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 MPP4Q96JB8 637 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 ATP6V1G3Q96LB4 118 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 MTERF1Q99551 399 aaKnown RBP4.64□□□□□ -1.67
SSR3-209ENST00000498205 HSD17B14Q9BPX1 270 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 NEURL2Q9BR09 285 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 LRRC1Q9BTT6 524 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 SPRY4Q9C004 299 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 RAB17Q9H0T7 212 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 ZHX3Q9H4I2 956 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 KLHL1Q9NR64 748 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 FAM207AQ9NSI2 230 aaPredicted RBP4.64□□□□□ -1.67
SSR3-209ENST00000498205 OLA1Q9NTK5 396 aaKnown RBP4.64□□□□□ -1.67
SSR3-209ENST00000498205 DMAC2Q9NW81 257 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 SLC12A6Q9UHW9 1150 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 PADI1Q9ULC6 663 aa4.64□□□□□ -1.67
SSR3-209ENST00000498205 SIPA1L1O43166 1804 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 A0A087X0M5 115 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 A0A087X0T9 212 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 A0A1B0GX30 115 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 KANSL1LA0AUZ9 987 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 FAM172BPA6NC97 362 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 GOLGA6L10A6NI86 522 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 ZNF233A6NK53 670 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 MEIS2O14770 477 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 KCNN4O15554 427 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 TOM1O60784 492 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 PALMO75781 387 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 UFL1O94874 794 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 NKX2-2O95096 273 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 MOCS3O95396 460 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 TDP2O95551 362 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 PLEKP08567 350 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 H2AFZP0C0S5 128 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 FAM228BP0C875 321 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 ACTN1P12814 892 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 ZNF23P17027 643 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 TMEM11P17152 192 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 NR1D1P20393 614 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 NR2F2P24468 414 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 PON1P27169 355 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 ALDH1B1P30837 517 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 ICAM3P32942 547 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 ARL3P36405 182 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 TNNT3P45378 269 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 F2RL1P55085 397 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 PTENP60484 403 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 POLR2FP61218 127 aaKnown RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 PRAMEP78395 509 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 SETQ01105 290 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 ITGB3BPQ13352 177 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 GIT2Q14161 759 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 ZNF234Q14588 700 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 HERC4Q5GLZ8 1057 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 NCEH1Q6PIU2 408 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 C6orf89Q6UWU4 347 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 H2AFVQ71UI9 128 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 SATL1Q86VE3 508 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 GPBP1Q86WP2 473 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 CCDC50Q8IVM0 306 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 CCDC13Q8IYE1 715 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 C1orf87Q8N0U7 546 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 SPATA3Q8NHX4 192 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 DNASE2BQ8WZ79 361 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 ABTB1Q969K4 478 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 TEKT1Q969V4 418 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 PGM2Q96G03 612 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 IWS1Q96ST2 819 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 TXLNGYQ9BZA5 131 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 TMEM39BQ9GZU3 492 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 STMN4Q9H169 189 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 MUC13Q9H3R2 512 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 SLC28A3Q9HAS3 691 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 SCPEP1Q9HB40 452 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 TMBIM4Q9HC24 238 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 RANGRFQ9HD47 186 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 TXLNGQ9NUQ3 528 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 TBC1D7Q9P0N9 293 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 OR14J1Q9UGF5 321 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 LCMT1Q9UIC8 334 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 FBXW11Q9UKB1 542 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 FBXL2Q9UKC9 423 aa4.63□□□□□ -1.67
SSR3-209ENST00000498205 RGPD3A6NKT7 1758 aaPredicted RBP4.63□□□□□ -1.67
SSR3-209ENST00000498205 RGPD4Q7Z3J3 1758 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms