RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 GPR88Q9GZN0 384 aa2.95□□□□□ -1.94
PSPC1-205ENST00000497722 ZMYND12Q9H0C1 365 aa2.95□□□□□ -1.94
PSPC1-205ENST00000497722 Q9N2K0 584 aa2.95□□□□□ -1.94
PSPC1-205ENST00000497722 SDR39U1Q9NRG7 319 aaPredicted RBP2.95□□□□□ -1.94
PSPC1-205ENST00000497722 INTS9Q9NV88 658 aaKnown RBP2.95□□□□□ -1.94
PSPC1-205ENST00000497722 OR6C2Q9NZP2 312 aa2.95□□□□□ -1.94
PSPC1-205ENST00000497722 CHKBQ9Y259 395 aa2.95□□□□□ -1.94
PSPC1-205ENST00000497722 MMP24Q9Y5R2 645 aa2.95□□□□□ -1.94
PSPC1-205ENST00000497722 IGHV4-4A0A075B6R2 117 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 A0A1B0GVY2 172 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 A8MXE2 369 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 AP5Z1O43299 807 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 SPRY1O43609 319 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-205ENST00000497722 EXTL3O43909 919 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 OR10H2O60403 315 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 SNX3O60493 162 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 TBX10O75333 385 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 TOMM70O94826 608 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 MOCS3O95396 460 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 HSP90AB1P08238 724 aaKnown RBP2.94□□□□□ -1.94
PSPC1-205ENST00000497722 CD48P09326 243 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 PATE4P0C8F1 98 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 STAG3L1P0CL83 205 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 RNF224P0DH78 156 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 ERVK-10P10266 1014 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 DARSP14868 501 aaKnown RBP2.94□□□□□ -1.94
PSPC1-205ENST00000497722 LHCGRP22888 699 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 MPZP25189 248 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 ALDH4A1P30038 563 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 LHX1P48742 406 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 RAD23AP54725 363 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 MAZP56270 477 aaKnown RBP2.94□□□□□ -1.94
PSPC1-205ENST00000497722 PMP22Q01453 160 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 ITGA9Q13797 1035 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 CA9Q16790 459 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 TMEM30BQ3MIR4 351 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 CTR9Q6PD62 1173 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 FAM198BQ6UWH4 519 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 RBPMS2Q6ZRY4 209 aaKnown RBP2.94□□□□□ -1.94
PSPC1-205ENST00000497722 ERN2Q76MJ5 926 aaKnown RBP2.94□□□□□ -1.94
PSPC1-205ENST00000497722 G2E3Q7L622 706 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 SLFN11Q7Z7L1 901 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 MMD2Q8IY49 270 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 OR4C3Q8NH37 302 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 OR52N5Q8NH56 324 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 METTL21AQ8WXB1 218 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 SENP5Q96HI0 755 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-205ENST00000497722 FAM71F1Q96KD3 344 aaPredicted RBP2.94□□□□□ -1.94
PSPC1-205ENST00000497722 RMDN2Q96LZ7 410 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 FEVQ99581 238 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 LITAFQ99732 161 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 SLC25A23Q9BV35 468 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 DGCR6LQ9BY27 220 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 MTMR12Q9C0I1 747 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 WDR13Q9H1Z4 485 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 FN3KQ9H479 309 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 RNF121Q9H920 327 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 TRPV4Q9HBA0 871 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 EPHA6Q9UF33 1036 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 LRWD1Q9UFC0 647 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 GRID1Q9ULK0 1009 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 R4GN57 208 aa2.94□□□□□ -1.94
PSPC1-205ENST00000497722 SOS1Q07889 1333 aaPredicted RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 A0A1W2PPQ1 181 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 A0A1W2PPW3 197 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 TMEM221A6NGB7 291 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 DFFBO76075 338 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 IGLV1-44P01699 117 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 CEACAM1P13688 526 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 CD22P20273 847 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 ACAT1P24752 427 aaKnown RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 CAPZA1P52907 286 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 HNRNPKP61978 463 aaKnown RBP eCLIP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 POLR2LP62875 67 aaKnown RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 ILF2Q12905 390 aaKnown RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 TRAP1Q12931 704 aaKnown RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 TAF10Q12962 218 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 NONOQ15233 471 aaKnown RBP eCLIP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 E2F5Q15329 346 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 UGT3A2Q3SY77 523 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 ZFP69Q49AA0 526 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 PET117Q6UWS5 81 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 PIGZQ86VD9 579 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 AMIGO1Q86WK6 493 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 DZIP1Q86YF9 867 aaKnown RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 CCAR2Q8N163 923 aaKnown RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 ZNF843Q8N446 348 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 MAPKAPK5-AS1Q8N8E1 139 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 CCDC63Q8NA47 563 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 ADAD2Q8NCV1 583 aaKnown RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 CTCFLQ8NI51 663 aaPredicted RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 VANGL1Q8TAA9 524 aaPredicted RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 PIGBQ92521 554 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 TSACCQ96A04 125 aaPredicted RBP2.93□□□□□ -1.94
PSPC1-205ENST00000497722 LGALS12Q96DT0 336 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 ARSGQ96EG1 525 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 PGM2Q96G03 612 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 FAM20AQ96MK3 541 aa2.93□□□□□ -1.94
PSPC1-205ENST00000497722 FAM129AQ9BZQ8 928 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms