RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 CX3CL1P78423 397 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 ARF1P84077 181 aaKnown RBP4.66□□□□□ -1.66
MDM2-220ENST00000496959 HNRNPDQ14103 355 aaKnown RBP4.66□□□□□ -1.66
MDM2-220ENST00000496959 MDH1BQ5I0G3 518 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 GRTP1Q5TC63 336 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 OR2T11Q8NH01 316 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 RNF128Q8TEB7 428 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 MPP4Q96JB8 637 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 AGAP3Q96P47 875 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 OR6C1Q96RD1 312 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 CABLES2Q9BTV7 478 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 PITPNM3Q9BZ71 974 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 SOS1Q07889 1333 aaPredicted RBP4.66□□□□□ -1.66
MDM2-220ENST00000496959 UTRNP46939 3433 aa4.66□□□□□ -1.66
MDM2-220ENST00000496959 INSRP06213 1382 aa4.65□□□□□ -1.66
MDM2-220ENST00000496959 DLEC1Q9Y238 1755 aa4.65□□□□□ -1.66
MDM2-220ENST00000496959 NCAPD2Q15021 1401 aa4.65□□□□□ -1.66
MDM2-220ENST00000496959 PXDNLA1KZ92 1463 aa4.65□□□□□ -1.66
MDM2-220ENST00000496959 LOC101059948A0A1B0GTJ6 334 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 E9PQ18 207 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 HSP90AB1P08238 724 aaKnown RBP4.65□□□□□ -1.67
MDM2-220ENST00000496959 MAPK4P31152 587 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 LMO4P61968 165 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 PNRC1Q12796 327 aaPredicted RBP4.65□□□□□ -1.67
MDM2-220ENST00000496959 DDX10Q13206 875 aaKnown RBP4.65□□□□□ -1.67
MDM2-220ENST00000496959 SGSM1Q2NKQ1 1148 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 CTU2Q2VPK5 515 aaKnown RBP4.65□□□□□ -1.67
MDM2-220ENST00000496959 ZNF613Q6PF04 617 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 TTC39CQ8N584 583 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 BMPERQ8N8U9 685 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 ANKRD52Q8NB46 1076 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 KBTBD8Q8NFY9 601 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 SAT2Q96F10 170 aaPredicted RBP4.65□□□□□ -1.67
MDM2-220ENST00000496959 EGFL8Q99944 293 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 DCTN5Q9BTE1 182 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 FGFBP2Q9BYJ0 223 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 VN1R1Q9GZP7 353 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 LARSQ9P2J5 1176 aaKnown RBP4.65□□□□□ -1.67
MDM2-220ENST00000496959 RHCGQ9UBD6 479 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 RIPK3Q9Y572 518 aa4.65□□□□□ -1.67
MDM2-220ENST00000496959 DICER1Q9UPY3 1922 aaKnown RBP4.64□□□□□ -1.67
MDM2-220ENST00000496959 TIAM2Q8IVF5 1701 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 PTGES3LE9PB15 166 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 TRIM49P0CI25 452 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 TRIM49CP0CI26 452 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 CA6P23280 308 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 SUOXP51687 545 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 PRELPP51888 382 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 MFAP4P55083 255 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 DCAF7P61962 342 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 TMF1P82094 1093 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 XKR6Q5GH73 641 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 CCDC30Q5VVM6 783 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 PIGZQ86VD9 579 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 RAB42Q8N4Z0 105 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 PAPD5Q8NDF8 572 aaKnown RBP4.64□□□□□ -1.67
MDM2-220ENST00000496959 C18orf12Q96KH6 178 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 C16orf70Q9BSU1 422 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 LAT2Q9GZY6 243 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 TMOD3Q9NYL9 352 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 ZDHHC2Q9UIJ5 367 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 HACL1Q9UJ83 578 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 TONSLQ96HA7 1378 aa4.64□□□□□ -1.67
MDM2-220ENST00000496959 CCDC88AQ3V6T2 1871 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 GAPDHSO14556 408 aaPredicted RBP4.63□□□□□ -1.67
MDM2-220ENST00000496959 VPREB1P12018 145 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 CA4P22748 312 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 SLC6A6P31641 620 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 GARSP41250 739 aaKnown RBP4.63□□□□□ -1.67
MDM2-220ENST00000496959 ARSEP51690 589 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 PDX1P52945 283 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 HERV-K104P61576 105 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 TMCO3Q6UWJ1 677 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 RSRC2Q7L4I2 434 aaKnown RBP4.63□□□□□ -1.67
MDM2-220ENST00000496959 FAM114A1Q8IWE2 563 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 MARVELD2Q8N4S9 558 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 MOSPD2Q8NHP6 518 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 OLIG1Q8TAK6 271 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 FAM222BQ8WU58 562 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 DYRK2Q92630 601 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 PPIL3Q9H2H8 161 aaKnown RBP4.63□□□□□ -1.67
MDM2-220ENST00000496959 ARRDC1-AS1Q9H2J1 176 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 KCNK15Q9H427 330 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 A4GALTQ9NPC4 353 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 ASIC3Q9UHC3 531 aa4.63□□□□□ -1.67
MDM2-220ENST00000496959 LNP1A1A4G5 178 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 HYKKA2RU49 373 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 AP3D1O14617 1153 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 MMP10P09238 476 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 RFC4P35249 363 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 HADHAP40939 763 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 NKX2-1P43699 371 aaPredicted RBP4.62□□□□□ -1.67
MDM2-220ENST00000496959 NR1D2Q14995 579 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 HAUS6Q7Z4H7 955 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 COMMD2Q86X83 199 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 MAPKAPK5-AS1Q8N8E1 139 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 NIPA2Q8N8Q9 360 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 OR4C3Q8NH37 302 aa4.62□□□□□ -1.67
MDM2-220ENST00000496959 ZNRF4Q8WWF5 429 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms