RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 TMEM71Q6P5X7 295 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 KLHDC8AQ8IYD2 350 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 PYCR2Q96C36 320 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 CD180Q99467 661 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 MIPEPQ99797 713 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 TMEM79Q9BSE2 394 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 POMT2Q9UKY4 750 aa21.02■□□□□ 0.95
C9orf3-222ENST00000496567 PRICKLE3O43900 615 aaPredicted RBP21.01■□□□□ 0.95
C9orf3-222ENST00000496567 FKBP9O95302 570 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 UGT2B7P16662 529 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 PRDX3P30048 256 aaKnown RBP21.01■□□□□ 0.95
C9orf3-222ENST00000496567 PEBP1P30086 187 aaKnown RBP21.01■□□□□ 0.95
C9orf3-222ENST00000496567 ETV4P43268 484 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 SIM1P81133 766 aaPredicted RBP21.01■□□□□ 0.95
C9orf3-222ENST00000496567 SF1Q15637 639 aaKnown RBP21.01■□□□□ 0.95
C9orf3-222ENST00000496567 C18orf21Q32NC0 220 aaPredicted RBP21.01■□□□□ 0.95
C9orf3-222ENST00000496567 PRAMEF13Q5VWM6 474 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 SPESP1Q6UW49 350 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 TGM7Q96PF1 710 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 OR2A14Q96R47 310 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 SELENOSQ9BQE4 189 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 HAUS8Q9BT25 410 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 ABCF3Q9NUQ8 709 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 INTS7Q9NVH2 962 aaKnown RBP21.01■□□□□ 0.95
C9orf3-222ENST00000496567 NKIRAS1Q9NYS0 192 aa21.01■□□□□ 0.95
C9orf3-222ENST00000496567 ATXN7L1Q9ULK2 861 aaPredicted RBP21.01■□□□□ 0.95
C9orf3-222ENST00000496567 MN1Q10571 1320 aaPredicted RBP21■□□□□ 0.95
C9orf3-222ENST00000496567 SPAARA0A1B0GVQ0 90 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 WDR47O94967 919 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 CCNDBP1O95273 360 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 HPDP32754 393 aaPredicted RBP21■□□□□ 0.95
C9orf3-222ENST00000496567 CSF2RBP32927 897 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 AGTR2P50052 363 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 CFHR1Q03591 330 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 PCBP2Q15366 365 aaKnown RBP eCLIP21■□□□□ 0.95
C9orf3-222ENST00000496567 SLC5A12Q1EHB4 618 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 FBXO48Q5FWF7 155 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 LCTLQ6UWM7 567 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 LRRC70Q7Z2Q7 622 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 THOC6Q86W42 341 aaKnown RBP21■□□□□ 0.95
C9orf3-222ENST00000496567 OR4D9Q8NGE8 314 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 OR2A1Q8NGT9 310 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 NUDT22Q9BRQ3 303 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 OPTCQ9UBM4 332 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 TAC3Q9UHF0 121 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 SLC22A14Q9Y267 594 aa21■□□□□ 0.95
C9orf3-222ENST00000496567 D6RAR5 112 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 CCNT2O60583 730 aaKnown RBP20.99■□□□□ 0.95
C9orf3-222ENST00000496567 KCNK5O95279 499 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 C9P02748 559 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 FTH1P19P0C7X4 201 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 CMPK1P30085 196 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 GDF5P43026 501 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 PRKAA2P54646 552 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 GFERP55789 205 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 PRDX1Q06830 199 aaKnown RBP20.99■□□□□ 0.95
C9orf3-222ENST00000496567 MPP2Q14168 576 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 CARFQ8N187 725 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 ANKRD42Q8N9B4 389 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 FLVCR1-AS1Q8TAF5 88 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 SREK1Q8WXA9 508 aaKnown RBP20.99■□□□□ 0.95
C9orf3-222ENST00000496567 ESAMQ96AP7 390 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 ACAT2Q9BWD1 397 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 CAPS2Q9BXY5 557 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 DNAJC11Q9NVH1 559 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 OXSMQ9NWU1 459 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 KCNE2Q9Y6J6 123 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 UNC13CQ8NB66 2214 aa20.99■□□□□ 0.95
C9orf3-222ENST00000496567 TLCD2A6NGC4 264 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 K7EPI3 171 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 DKK1O94907 266 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 NPPBP16860 134 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 PSMB5P28074 263 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 EEF1DP29692 281 aaKnown RBP20.98■□□□□ 0.95
C9orf3-222ENST00000496567 PPP1CAP62136 330 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 HERVK_113P63132 956 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 ABATP80404 500 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 ASPHQ12797 758 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 PCLAFQ15004 111 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 ICE2Q659A1 982 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 FAM92BQ6ZTR7 304 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 SLCO6A1Q86UG4 719 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 OR2L3Q8NG85 312 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 ERVK-6Q9BXR3 956 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 C1GALT1Q9NS00 363 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 DYRK1BQ9Y463 629 aa20.98■□□□□ 0.95
C9orf3-222ENST00000496567 A0A0J9YY10 115 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 CASC3O15234 703 aaKnown RBP20.97■□□□□ 0.95
C9orf3-222ENST00000496567 TOX3O15405 576 aaPredicted RBP20.97■□□□□ 0.95
C9orf3-222ENST00000496567 SIX3O95343 332 aaPredicted RBP20.97■□□□□ 0.95
C9orf3-222ENST00000496567 HOXB3P14651 431 aaPredicted RBP20.97■□□□□ 0.95
C9orf3-222ENST00000496567 IMPDH1P20839 514 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 CDH3P22223 829 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 KCNA4P22459 653 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 PIK3CGP48736 1102 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 DNAJB13P59910 316 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 NAA20P61599 178 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 NAA25Q14CX7 972 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 HHATQ5VTY9 493 aa20.97■□□□□ 0.95
C9orf3-222ENST00000496567 LIPMQ5VYY2 423 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms