RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TNPO3Q9Y5L0 923 aaKnown RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 LRRC37A3O60309 1634 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 SYNJ2BP-COX16A0A087WUM0 186 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 SSX4O60224 188 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 STX11O75558 287 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 CCNB2O95067 398 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 PGK1P00558 417 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 RLN2P04090 185 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 LTA4HP09960 611 aaKnown RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 ACADMP11310 421 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 SLC6A4P31645 630 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 NNMTP40261 264 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 LAPTM5Q13571 262 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 TBCEQ15813 527 aaPredicted RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 PROX2Q3B8N5 592 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 COQ5Q5HYK3 327 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 SLC35F1Q5T1Q4 408 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 AVPI1Q5T686 147 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF549Q6P9A3 640 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 GPAT4Q86UL3 456 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 TSPYL5Q86VY4 417 aaPredicted RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 DPP10Q8N608 796 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 EXOSC8Q96B26 276 aaKnown RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 NLNQ9BYT8 704 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 ARNT2Q9HBZ2 717 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 CMTM6Q9NX76 183 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 SAMD4AQ9UPU9 718 aaKnown RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 CA5BQ9Y2D0 317 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 ANKRD12Q6UB98 2062 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 PIK3C2AO00443 1686 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 PITPNM1O00562 1244 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 ZBTB24O43167 697 aaPredicted RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 AKAP8O43823 692 aaKnown RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 TOXO94900 526 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 SOX30O94993 753 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 TSPAN12O95859 305 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 APBA3O96018 575 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 NFICP08651 508 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 SUPT20HL2P0C7V6 817 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 TKTL1P51854 596 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 BCAT1P54687 386 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 MXD4Q14582 209 aaPredicted RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 RNF212Q495C1 297 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 TCEAL6Q6IPX3 200 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 LRRN1Q6UXK5 716 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 B3GNT8Q7Z7M8 397 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 FAM124AQ86V42 546 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 JAZF1Q86VZ6 243 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 CIR1Q86X95 450 aaPredicted RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 NLGN4XQ8N0W4 816 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 OR2T35Q8NGX2 323 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 OR52N1Q8NH53 320 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 NPAS1Q99742 590 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 WDR83Q9BRX9 315 aaKnown RBP8□□□□□ -1.13
CRNKL1-205ENST00000496549 MEAF6Q9HAF1 191 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 PPP4R1LQ9P1A2 415 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 PCDHB14Q9Y5E9 798 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 CAMTA1Q9Y6Y1 1673 aa8□□□□□ -1.13
CRNKL1-205ENST00000496549 SLIT2O94813 1529 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TTC24A2A3L6 582 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SUPT3HB4E1H0 165 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 MID1O15344 667 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 PRMT3O60678 531 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 CDRT1O95170 752 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 CD63P08962 238 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TGM4P49221 684 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ARFIP1P53367 373 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 KCNC3Q14003 757 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 KEAP1Q14145 624 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TRAM2Q15035 370 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ZDHHC21Q8IVQ6 265 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TMEM151BQ8IW70 566 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 OR52K1Q8NGK4 314 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 BBS4Q96RK4 519 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 FSD1LQ9BXM9 530 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 CHIAQ9BZP6 476 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 PTPRHQ9HD43 1115 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 EMC7Q9NPA0 242 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 RPS6KA6Q9UK32 745 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF490Q9ULM2 529 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TMX2Q9Y320 296 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 AFDNP55196 1824 aaKnown RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 UBE2QL1A1L167 161 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 OR2A25A4D2G3 310 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 OR14I1A6ND48 311 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ARGFXA6NJG6 315 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 E9PI62 339 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 MDM4O15151 490 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 OIP5O43482 229 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 CRTAPO75718 401 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 GRAP2O75791 330 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 ZNF30P17039 623 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 PPP3R1P63098 170 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 GPR17Q13304 367 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SEMA5AQ13591 1074 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 RIN1Q13671 783 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 BAATQ14032 418 aaPredicted RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 TOMM20Q15388 145 aa7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 SF3A2Q15428 464 aaKnown RBP7.99□□□□□ -1.13
CRNKL1-205ENST00000496549 GRIK4Q16099 956 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms