RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 A0A1B0GX78 115 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 FITM1A5D6W6 292 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 A6NL46 340 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 MASP2O00187 686 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 PGRMC1O00264 195 aaKnown RBP13.68□□□□□ -0.22
VTI1A-209ENST00000496445 NRDCO43847 1150 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 FKBP9O95302 570 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 MED26O95402 600 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 PKMP14618 531 aaKnown RBP13.68□□□□□ -0.22
VTI1A-209ENST00000496445 PAMP19021 973 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 RRADP55042 308 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 SARNPP82979 210 aaKnown RBP13.68□□□□□ -0.22
VTI1A-209ENST00000496445 SSPNQ14714 243 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 FRMPD2BQ6IN97 320 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 TTC23LQ6PF05 361 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 DENND6AQ8IWF6 608 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 SLC35F6Q8N357 371 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 NAT8LQ8N9F0 302 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 OR2A1Q8NGT9 310 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.68□□□□□ -0.22
VTI1A-209ENST00000496445 FOPNLQ96NB1 174 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 SELENOSQ9BQE4 189 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 SYNPO2LQ9H987 977 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 XAB2Q9HCS7 855 aaKnown RBP13.68□□□□□ -0.22
VTI1A-209ENST00000496445 FBXO6Q9NRD1 293 aaPredicted RBP13.68□□□□□ -0.22
VTI1A-209ENST00000496445 CUTCQ9NTM9 273 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 INTS10Q9NVR2 710 aaKnown RBP13.68□□□□□ -0.22
VTI1A-209ENST00000496445 SAMD15Q9P1V8 674 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 ZNF451Q9Y4E5 1061 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 PCDHGB7Q9Y5F8 929 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 MRFAP1Q9Y605 127 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 DOCK10Q96BY6 2186 aa13.68□□□□□ -0.22
VTI1A-209ENST00000496445 SDR42E2A6NKP2 422 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 TARM1B6A8C7 271 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 MYO1CO00159 1063 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 DSCR3O14972 297 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 PFDN6O15212 129 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 KIF5CO60282 957 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 PHF2O75151 1096 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 PSIP1O75475 530 aaKnown RBP13.67□□□□□ -0.22
VTI1A-209ENST00000496445 ONECUT2O95948 504 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 CHRM3P20309 590 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 ALAS2P22557 587 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 SLC1A2P43004 574 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 ARSFP54793 590 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 CTBP1Q13363 440 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 KLHL38Q2WGJ6 581 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 PRR30Q53SZ7 412 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-209ENST00000496445 ZC3H12BQ5HYM0 836 aaKnown RBP13.67□□□□□ -0.22
VTI1A-209ENST00000496445 ZNF549Q6P9A3 640 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 RNF44Q7L0R7 432 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 RAB42Q8N4Z0 105 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 METTL27Q8N6F8 245 aaPredicted RBP13.67□□□□□ -0.22
VTI1A-209ENST00000496445 RBMXL3Q8N7X1 1067 aaKnown RBP13.67□□□□□ -0.22
VTI1A-209ENST00000496445 Q8NA96 180 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 ACTRT1Q8TDG2 376 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 ZUFSPQ96AP4 578 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 FKBP10Q96AY3 582 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 IP6K3Q96PC2 410 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 OSBPL9Q96SU4 736 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 SPSB2Q99619 263 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 SMAD5Q99717 465 aaKnown RBP13.67□□□□□ -0.22
VTI1A-209ENST00000496445 KCNF1Q9H3M0 494 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 SLC6A20Q9NP91 592 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 P4HTMQ9NXG6 502 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 GPR83Q9NYM4 423 aa13.67□□□□□ -0.22
VTI1A-209ENST00000496445 SPTAN1Q13813 2472 aaKnown RBP13.66□□□□□ -0.22
VTI1A-209ENST00000496445 LOC105369274A0A096LPK9 316 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 IGKV1-8A0A0C4DH67 115 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 LOC102723532A0A0G2JNH3 316 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 A0A0J9YVX5 310 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 OR2A25A4D2G3 310 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 E5RI56 91 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 DPM1O60762 260 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 USP1O94782 785 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 CD63P08962 238 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 UQCRFS1P47985 274 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 FNTAP49354 379 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 VSX2P58304 361 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-209ENST00000496445 CUL1Q13616 776 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 GRM7Q14831 915 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 NKG7Q16617 165 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 TCTE1Q5JU00 501 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 DCAF10Q5QP82 559 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 YOD1Q5VVQ6 348 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-209ENST00000496445 JMJD6Q6NYC1 403 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-209ENST00000496445 OR4N4Q8N0Y3 316 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 TTC29Q8NA56 475 aaPredicted RBP13.66□□□□□ -0.22
VTI1A-209ENST00000496445 OR9A1PQ8NGU1 263 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 CPT1CQ8TCG5 803 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 MAGEC3Q8TD91 643 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 SIGLEC10Q96LC7 697 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 PKP4Q99569 1192 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 MFRPQ9BY79 579 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 SLC26A1Q9H2B4 701 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 LUZP4Q9P127 313 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 CTSFQ9UBX1 484 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 VPS9D1Q9Y2B5 631 aa13.66□□□□□ -0.22
VTI1A-209ENST00000496445 RP1L1Q8IWN7 2480 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms