RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	SPTB	P11277	2137 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	RELN	P78509	3460 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	NBPF19	A0A087WUL8	3843 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030		A0A096LPK6	155 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	PIPSL	A2A3N6	862 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030		A8MU76	341 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	FOXO6	A8MYZ6	492 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	TMX2-CTNND1	H3BSU7	103 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	KLK10	O43240	276 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	MPO	P05164	745 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	UGT2B7	P16662	529 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	IMPA1	P29218	277 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	TYK2	P29597	1187 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	SERPINB8	P50452	374 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	UCN	P55089	124 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	ATP6V0D1	P61421	351 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	YBX1	P67809	324 aa	Known RBP	11.48	□□□□□ -0.57
APTX-233	ENST00000496030	VAC14	Q08AM6	782 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	CSHL1	Q14406	222 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	KIR2DS3	Q14952	304 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	ARHGAP19	Q14CB8	494 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	SNAP47	Q5SQN1	464 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	PHF19	Q5T6S3	580 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	ANKS6	Q68DC2	871 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	SH2D5	Q6ZV89	423 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	CLEC14A	Q86T13	490 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	FAM20C	Q8IXL6	584 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	IQCK	Q8N0W5	287 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	PLD6	Q8N2A8	252 aa	Known RBP	11.48	□□□□□ -0.57
APTX-233	ENST00000496030	BMPER	Q8N8U9	685 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	OR2A1	Q8NGT9	310 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	EPS8L3	Q8TE67	593 aa	Known RBP	11.48	□□□□□ -0.57
APTX-233	ENST00000496030	KCTD4	Q8WVF5	259 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	NXNL1	Q96CM4	212 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	SLC41A2	Q96JW4	573 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	CCDC138	Q96M89	665 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	CD180	Q99467	661 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	CCDC77	Q9BR77	488 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	STOX2	Q9P2F5	926 aa	Predicted RBP	11.48	□□□□□ -0.57
APTX-233	ENST00000496030	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.48	□□□□□ -0.57
APTX-233	ENST00000496030	KLHL3	Q9UH77	587 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	HEATR5B	Q9P2D3	2071 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030	BSN	Q9UPA5	3926 aa		11.48	□□□□□ -0.57
APTX-233	ENST00000496030		A0A087X1B8	175 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	CCDC187	A0A096LP49	1063 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	GSAP	A4D1B5	854 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	TLCD2	A6NGC4	264 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	C2orf74	A8MZ97	194 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	MATN2	O00339	956 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	TERT	O14746	1132 aa	Known RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	HGS	O14964	777 aa	Predicted RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	KDM1A	O60341	852 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	PRAMEF10	O60809	474 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	SYF2	O95926	243 aa	Known RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	NTRK1	P04629	796 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	ENO2	P09104	434 aa	Predicted RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	LTA4H	P09960	611 aa	Known RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	FGF3	P11487	239 aa	Predicted RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	CCL4	P13236	92 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	PVR	P15151	417 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	CYP2A7	P20853	494 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	MAP4	P27816	1152 aa	Known RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	SLCO1A2	P46721	670 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	PNLIPRP1	P54315	467 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	NFKB2	Q00653	900 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	NFATC3	Q12968	1075 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	PRKAA1	Q13131	559 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	ZIC1	Q15915	447 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	CACHD1	Q5VU97	1274 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	ARMC6	Q6NXE6	501 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	AGTRAP	Q6RW13	159 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	SPESP1	Q6UW49	350 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	RAPH1	Q70E73	1250 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	TAOK1	Q7L7X3	1001 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	CCDC91	Q7Z6B0	441 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	TRIM73	Q86UV7	250 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	CARF	Q8N187	725 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	TMEM151A	Q8N4L1	468 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	PPFIBP2	Q8ND30	876 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	KCNE4	Q8WWG9	221 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	KIAA1191	Q96A73	305 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	FBXL8	Q96CD0	374 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	MTBP	Q96DY7	904 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	TRAPPC9	Q96Q05	1148 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	TMEM109	Q9BVC6	243 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	RAB11FIP5	Q9BXF6	653 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	ZNF768	Q9H5H4	540 aa	Known RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	PPCS	Q9HAB8	311 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	C1GALT1	Q9NS00	363 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	ZNF358	Q9NW07	568 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	OCIAD1	Q9NX40	245 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	SIDT1	Q9NXL6	827 aa	Known RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	UTP6	Q9NYH9	597 aa	Known RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030	TBK1	Q9UHD2	729 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	LNPEP	Q9UIQ6	1025 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	SSUH2	Q9Y2M2	353 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	OARD1	Q9Y530	152 aa		11.47	□□□□□ -0.57
APTX-233	ENST00000496030	USP9Y	O00507	2555 aa	Predicted RBP	11.47	□□□□□ -0.57
APTX-233	ENST00000496030		A0A1W2PPM1	405 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 25 ms