RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 PRAMEF4O60810 478 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 SLCO2B1O94956 709 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 GSTM1P09488 218 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 IL1RNP18510 177 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 PTPN6P29350 595 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 ETV3P41162 512 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 HNRNPFP52597 415 aaKnown RBP14.91□□□□□ -0.02
CALD1-222ENST00000495522 PFN3P60673 137 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 GSTM4Q03013 218 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 ABHD18Q0P651 414 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 PRAMEF9Q5VWM5 478 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 LIPJQ5W064 366 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 GPR180Q86V85 440 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 ANKRD46Q86W74 232 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 CLVS1Q8IUQ0 354 aaPredicted RBP14.91□□□□□ -0.02
CALD1-222ENST00000495522 PNPT1Q8TCS8 783 aaKnown RBP14.91□□□□□ -0.02
CALD1-222ENST00000495522 MYLIPQ8WY64 445 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 REXO5Q96IC2 774 aaKnown RBP14.91□□□□□ -0.02
CALD1-222ENST00000495522 MUS81Q96NY9 551 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 HHIPQ96QV1 700 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 TCF25Q9BQ70 676 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 ZSCAN5AQ9BUG6 496 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 LINC00597Q9H2U6 94 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 HPS4Q9NQG7 708 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 TBC1D14Q9P2M4 693 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 NFKBIL1Q9UBC1 381 aaPredicted RBP14.91□□□□□ -0.02
CALD1-222ENST00000495522 ZNF232Q9UNY5 417 aa14.91□□□□□ -0.02
CALD1-222ENST00000495522 TSPAN11A1L157 253 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 KRT87PA6NCN2 255 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 QSOX1O00391 747 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 MOSPD3O75425 235 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 GSNP06396 782 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 MAP4P27816 1152 aaKnown RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 TTKP33981 857 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 HLCSP50747 726 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 IRF8Q02556 426 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 ZNF33BQ06732 778 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 EPS8Q12929 822 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 CSTF3Q12996 717 aaKnown RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 MYBPC3Q14896 1274 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 ARSIQ5FYB1 569 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 LY6G5CQ5SRR4 150 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 HENMT1Q5T8I9 393 aaKnown RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 TMEM215Q68D42 235 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 NOXRED1Q6NXP6 359 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 OTOP2Q7RTS6 562 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 FRS2Q8WU20 508 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 FCRL1Q96LA6 429 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 RIOK2Q9BVS4 552 aaKnown RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 USE1Q9NZ43 259 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 PLXNA2O75051 1894 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 DOCK6Q96HP0 2047 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 RFXANKO14593 260 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 RECQL5O94762 991 aaPredicted RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 LRATO95237 230 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 SERPINA1P01009 418 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 TIMP2P16035 220 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 PTPN2P17706 415 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 PRPS1L1P21108 318 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 NNMTP40261 264 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 CDKN2CP42773 168 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 LBX1P52954 281 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 DPY19L1Q2PZI1 675 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 TTC23Q5W5X9 447 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 KIAA0907Q7Z7F0 614 aaPredicted RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 ADHFE1Q8IWW8 467 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 NETO1Q8TDF5 533 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 CYB5D2Q8WUJ1 264 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 NELL1Q92832 810 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 TRIM43Q96BQ3 446 aaPredicted RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 ISOC1Q96CN7 298 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 RBM4BQ9BQ04 359 aaKnown RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 RBM4Q9BWF3 364 aaKnown RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 OSBPL10Q9BXB5 764 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 ING2Q9H160 280 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 TOR3AQ9H497 397 aa14.9□□□□□ -0.02
CALD1-222ENST00000495522 IFT80Q9P2H3 777 aaPredicted RBP14.9□□□□□ -0.02
CALD1-222ENST00000495522 PTPRSQ13332 1948 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 OR2AG2A6NM03 316 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 FADS2P1A8MWK0 482 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 TTC34A8MYJ7 566 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 PSIP1O75475 530 aaKnown RBP14.89□□□□□ -0.03
CALD1-222ENST00000495522 XPAP23025 273 aaPredicted RBP14.89□□□□□ -0.03
CALD1-222ENST00000495522 KIR3DL1P43629 444 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 IST1P53990 364 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 ZNF77Q15935 545 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 LRRC26Q2I0M4 334 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 ZNF284Q2VY69 593 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 SYTL3Q4VX76 610 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 RAVER1Q8IY67 606 aaKnown RBP14.89□□□□□ -0.03
CALD1-222ENST00000495522 C10orf111Q8N326 155 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 ZCCHC7Q8N3Z6 543 aaKnown RBP14.89□□□□□ -0.03
CALD1-222ENST00000495522 ATL1Q8WXF7 558 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 CLP1Q92989 425 aaKnown RBP14.89□□□□□ -0.03
CALD1-222ENST00000495522 EGLN2Q96KS0 407 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 MRGPRX3Q96LB0 322 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 FAM83CQ9BQN1 747 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 GPRC5BQ9NZH0 403 aa14.89□□□□□ -0.03
CALD1-222ENST00000495522 UTS2RQ9UKP6 389 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms