RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	FRG1	Q14331	258 aa	Known RBP	12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	NCF4	Q15080	339 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	PTCHD3	Q3KNS1	767 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	ZC3H12B	Q5HYM0	836 aa	Known RBP	12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	LCN10	Q6JVE6	187 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	FIGLA	Q6QHK4	219 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	IGDCC3	Q8IVU1	814 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	APLF	Q8IW19	511 aa	Predicted RBP	12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	ADAMTS17	Q8TE56	1095 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	THAP4	Q8WY91	577 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	DLG3	Q92796	817 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	ZUFSP	Q96AP4	578 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	ZNF285	Q96NJ3	590 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	GBP5	Q96PP8	586 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	DHRS4	Q9BTZ2	278 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	ANKMY1	Q9P2S6	941 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	TCFL5	Q9UL49	500 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	CORO1C	Q9ULV4	474 aa	Predicted RBP	12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	SNX7	Q9UNH6	387 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	CHMP2B	Q9UQN3	213 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	MAN2B2	Q9Y2E5	1009 aa		12.81	□□□□□ -0.36
RBM28-208	ENST00000495327	ZNF839	A8K0R7	811 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	EFCAB8	A8MWE9	144 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327		C9J4A7	227 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327		E7ESA3	106 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	GFY	I3L273	518 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	CTSB	P07858	339 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	SKIV2L2	P42285	1042 aa	Known RBP	12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	ETF1	P62495	437 aa	Known RBP	12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	FASTK	Q14296	549 aa	Known RBP	12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	TCTE1	Q5JU00	501 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	YOD1	Q5VVQ6	348 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	UGT3A1	Q6NUS8	523 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	RNF44	Q7L0R7	432 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	CPNE9	Q8IYJ1	553 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	ZNF655	Q8N720	491 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	ASB11	Q8WXH4	323 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	SMPDL3A	Q92484	453 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	KRT12	Q99456	494 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	MIPEP	Q99797	713 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	NDC1	Q9BTX1	674 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	SPRTN	Q9H040	489 aa	Predicted RBP	12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	TXLNG	Q9NUQ3	528 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	TAS2R13	Q9NYV9	303 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	TRMT6	Q9UJA5	497 aa	Known RBP	12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	PADI2	Q9Y2J8	665 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	KLHL20	Q9Y2M5	609 aa		12.8	□□□□□ -0.36
RBM28-208	ENST00000495327	MED13	Q9UHV7	2174 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	PCSK5	Q92824	1860 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	OR2A25	A4D2G3	310 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	FAM187A	A6NFU0	413 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	RFPL1	O75677	317 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	SLC16A8	O95907	504 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	AHSG	P02765	367 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	CD63	P08962	238 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	GABRB3	P28472	473 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	CMPK1	P30085	196 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	RPL21	P46778	160 aa	Known RBP	12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	CARS	P49589	748 aa	Known RBP	12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	RGS4	P49798	205 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	PNLIPRP1	P54315	467 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	ARSF	P54793	590 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	DCD	P81605	110 aa	Known RBP	12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	SP140	Q13342	867 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	TEDDM1	Q5T9Z0	273 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	CYHR1	Q6ZMK1	362 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	MCAT	Q8IVS2	390 aa	Known RBP	12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	BBOF1	Q8ND07	529 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	SPATA4	Q8NEY3	305 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	ZNF480	Q8WV37	535 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	CFAP36	Q96G28	342 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	PWWP2A	Q96N64	755 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	PKP4	Q99569	1192 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	NDN	Q99608	321 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	TRIM31	Q9BZY9	425 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	SLC6A20	Q9NP91	592 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	IRAK4	Q9NWZ3	460 aa		12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	DHCR7	Q9UBM7	475 aa	Known RBP	12.79	□□□□□ -0.36
RBM28-208	ENST00000495327	UBR5	O95071	2799 aa	Predicted RBP	12.79	□□□□□ -0.36
RBM28-208	ENST00000495327		A0A1B0GX78	115 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	FITM1	A5D6W6	292 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	ZBTB14	O43829	449 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	SRPX2	O60687	465 aa	Predicted RBP	12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	CTSV	O60911	334 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	CCNDBP1	O95273	360 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	MCM3	P25205	808 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	CASQ1	P31415	396 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	RPA3	P35244	121 aa	Predicted RBP	12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	GRM7	Q14831	915 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	RBM20	Q5T481	1227 aa	Known RBP	12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	TRMT10B	Q6PF06	316 aa	Known RBP	12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	UBE2R2	Q712K3	238 aa	Predicted RBP	12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	PIWIL4	Q7Z3Z4	852 aa	Known RBP	12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	MAATS1	Q7Z4T9	603 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	FKBP10	Q96AY3	582 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	ABHD17A	Q96GS6	310 aa		12.78	□□□□□ -0.36
RBM28-208	ENST00000495327	SELENOS	Q9BQE4	189 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms