RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CLEC14AQ86T13 490 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 ZNF248Q8NDW4 579 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 OR8K5Q8NH50 307 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 FLVCR1-AS1Q8TAF5 88 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 DCAKDQ8WVC6 231 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 ZUFSPQ96AP4 578 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 MTBPQ96DY7 904 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 TSNARE1Q96NA8 513 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 CNTNAP3BQ96NU0 1288 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 CTRCQ99895 268 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 PARD6BQ9BYG5 372 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 CNTNAP3Q9BZ76 1288 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 UNKQ9C0B0 810 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 PCBD2Q9H0N5 130 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 VPS11Q9H270 941 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 MRPS30Q9NP92 439 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 FGF21Q9NSA1 209 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 SIDT1Q9NXL6 827 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 STOX2Q9P2F5 926 aaPredicted RBP11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 FETUBQ9UGM5 382 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 TAC3Q9UHF0 121 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 SERTAD3Q9UJW9 196 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 OARD1Q9Y530 152 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 PCDHGA3Q9Y5H0 932 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 B3GALT1Q9Y5Z6 326 aa11.65□□□□□ -0.54
CSNK1E-213ENST00000495232 TARM1B6A8C7 271 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 C9orf172C9J069 976 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 E7ENX8 843 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 STMND1H3BQB6 276 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 PRICKLE3O43900 615 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 S100BP04271 92 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 C2P06681 752 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 CD1DP15813 335 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 MAGP20916 626 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 PSMB5P28074 263 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 HNMTP50135 292 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 ABATP80404 500 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 TAP2Q03519 686 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 NAE1Q13564 534 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 GPR19Q15760 415 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 KIAA1614Q5VZ46 1190 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 CAPN13Q6MZZ7 669 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 FIGLAQ6QHK4 219 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 ADGRD1Q6QNK2 874 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 LRRC69Q6ZNQ3 347 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 GPSM1Q86YR5 675 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 FAM20CQ8IXL6 584 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 GPR135Q8IZ08 494 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 KDF1Q8NAX2 398 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 OR2L3Q8NG85 312 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 OR2A1Q8NGT9 310 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 STAG3L4Q8TBR4 150 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 UBXN10Q96LJ8 280 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 SLC7A5P2Q9GIP4 190 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 TWSG1Q9GZX9 223 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 ATG10Q9H0Y0 220 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 PPCSQ9HAB8 311 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 APMAPQ9HDC9 416 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 IRAK4Q9NWZ3 460 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 PSMC3IPQ9P2W1 217 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 RNF112Q9ULX5 631 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 PCM1Q15154 2024 aa11.64□□□□□ -0.55
CSNK1E-213ENST00000495232 ANKRD12Q6UB98 2062 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 CHD8Q9HCK8 2581 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 A0A1W2PPV9 198 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 HMX2A2RU54 273 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 NCF1BA6NI72 391 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 NCF1CA8MVU1 366 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 TMEM150CB9EJG8 249 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 TRIM49D1C9J1S8 452 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 WISP3O95389 354 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 ALDOAP04075 364 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 MSL3P1P0C860 447 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 FGF5P12034 268 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 NCF1P14598 390 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 HSD17B3P37058 310 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 TBPL1P62380 186 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 CDKL1Q00532 357 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 PRDX1Q06830 199 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 IFFO1Q0D2I5 559 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 TGFBIQ15582 683 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 PPP1R3AQ16821 1122 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 ZC3H12BQ5HYM0 836 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 PRAMEF13Q5VWM6 474 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 ICE2Q659A1 982 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 CDHR3Q6ZTQ4 885 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 ADCK2Q7Z695 626 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 PROSER1Q86XN7 944 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 TMEM126BQ8IUX1 230 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 TCAIMQ8N3R3 496 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 AENQ8WTP8 325 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 EXT2Q93063 718 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 KIAA1191Q96A73 305 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 FBXL8Q96CD0 374 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 NAF1Q96HR8 494 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 CABS1Q96KC9 395 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 DCBLD2Q96PD2 775 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 FCRL4Q96PJ5 515 aa11.63□□□□□ -0.55
CSNK1E-213ENST00000495232 HAUS8Q9BT25 410 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms