RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 B3GNT6Q6ZMB0 384 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 UNC5AQ6ZN44 842 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 CREBRFQ8IUR6 639 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 OR5M9Q8NGP3 310 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 CCM2Q9BSQ5 444 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 YIPF4Q9BSR8 244 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 ZWILCHQ9H900 591 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 UGT1A7Q9HAW7 530 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 UGT1A10Q9HAW8 530 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 UGT1A8Q9HAW9 530 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 MAGEE1Q9HCI5 957 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 RBM22Q9NW64 420 aaKnown RBP eCLIP13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 HOOK1Q9UJC3 728 aaKnown RBP13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 FAM215AQ9Y5M1 114 aa13.73□□□□□ -0.21
CHMP2B-205ENST00000494980 IGLV3-12A0A075B6K2 115 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 BICDL2A1A5D9 508 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 MBD3L4A6NDZ8 208 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 TUBAL3A6NHL2 446 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 MBD3L5A6NJ08 208 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 AURKAO14965 403 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 SEC24DO94855 1032 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 MMP2P08253 660 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 CHRNB2P17787 502 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 PPP1R2P41236 205 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 NSFP46459 744 aaKnown RBP13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 ZNF165P49910 485 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 NR0B1P51843 470 aaKnown RBP13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 BTBD16Q32M84 506 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 KIAA0930Q6ICG6 404 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 H3F3CQ6NXT2 135 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 CYP4V2Q6ZWL3 525 aaPredicted RBP13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 LGI4Q8N135 537 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 POGLUT1Q8NBL1 392 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 PIGTQ969N2 578 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 SH3GL2Q99962 352 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 XPO4Q9C0E2 1151 aaKnown RBP13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 MVB12BQ9H7P6 319 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 IL26Q9NPH9 171 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 PLSCR2Q9NRY7 297 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 ZDHHC9Q9Y397 364 aa13.72□□□□□ -0.21
CHMP2B-205ENST00000494980 KLHL33A6NCF5 533 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 NPIPA2E9PIF3 369 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 NPIPA3F8WFD2 350 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 H3BRJ5 948 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 CALB1P05937 261 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 ZNF135P52742 658 aaPredicted RBP13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 SRSF2Q01130 221 aaKnown RBP13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 CDR2Q01850 454 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 MESDQ14696 234 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 PPP2R5EQ16537 467 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 GXYLT1Q4G148 440 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 ZNF585AQ6P3V2 769 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 DCUN1D2Q6PH85 259 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 FAM151BQ6UXP7 276 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 ZNF677Q86XU0 584 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 MAPK1IP1LQ8NDC0 245 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 MAML1Q92585 1016 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 RNASE6Q93091 150 aaKnown RBP13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 SMARCE1Q969G3 411 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 RNF25Q96BH1 459 aaPredicted RBP13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 KCNK13Q9HB14 408 aa13.71□□□□□ -0.21
CHMP2B-205ENST00000494980 ROS1P08922 2347 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 IGHV3-20A0A0C4DH32 117 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 FIGNL2A6NMB9 653 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 IFRD1O00458 451 aaPredicted RBP13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 CES2O00748 559 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 FAM157CP0CG43 387 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 MSH3P20585 1137 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 PEBP1P30086 187 aaKnown RBP13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 SHMT2P34897 504 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 GRIA3P42263 894 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 ASCL1P50553 236 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 BOP1Q14137 746 aaKnown RBP13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 BECN1Q14457 450 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 TAZQ16635 292 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 FAM214AQ32MH5 1076 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 PDLIM3Q53GG5 364 aaPredicted RBP13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 TCTE1Q5JU00 501 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 ZNF468Q5VIY5 522 aaPredicted RBP13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 RTL6Q6ICC9 239 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 PRMT9Q6P2P2 845 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 NT5DC3Q86UY8 548 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 SLC13A5Q86YT5 568 aaPredicted RBP13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 RELL2Q8NC24 303 aaPredicted RBP13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 LINC01560Q8TB33 94 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 HM13Q8TCT9 377 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 TRIB3Q96RU7 358 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 SELENOSQ9BQE4 189 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 YIPF2Q9BWQ6 316 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 THAP2Q9H0W7 228 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 YAE1D1Q9NRH1 226 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 HAUS2Q9NVX0 235 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 TRPC4Q9UBN4 977 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 B4GALT7Q9UBV7 327 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 SPO11Q9Y5K1 396 aa13.7□□□□□ -0.22
CHMP2B-205ENST00000494980 A0A0G2JK05 382 aa13.69□□□□□ -0.22
CHMP2B-205ENST00000494980 FITM1A5D6W6 292 aa13.69□□□□□ -0.22
CHMP2B-205ENST00000494980 ISM1B1AKI9 464 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms