RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 NDNQ99608 321 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 ACAT2Q9BWD1 397 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 TRIM31Q9BZY9 425 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 TLK1Q9UKI8 766 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 PADI2Q9Y2J8 665 aa31.88■■■□□ 2.69
CBX4-203ENST00000494546 ARGFXA6NJG6 315 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 TARM1B6A8C7 271 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 ENO3P13929 434 aaPredicted RBP31.87■■■□□ 2.69
CBX4-203ENST00000494546 SLC9A5Q14940 896 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 SUSD1Q6UWL2 747 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 ATG14Q6ZNE5 492 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 APLFQ8IW19 511 aaPredicted RBP31.87■■■□□ 2.69
CBX4-203ENST00000494546 CPNE9Q8IYJ1 553 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 ADAMTS17Q8TE56 1095 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 C17orf62Q9BQA9 187 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 SELENOSQ9BQE4 189 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 DHRS4Q9BTZ2 278 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 TRIM55Q9BYV6 548 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 IFT80Q9P2H3 777 aaPredicted RBP31.87■■■□□ 2.69
CBX4-203ENST00000494546 CHMP2BQ9UQN3 213 aa31.87■■■□□ 2.69
CBX4-203ENST00000494546 SYF2O95926 243 aaKnown RBP31.86■■■□□ 2.69
CBX4-203ENST00000494546 MPC1LP0DKB6 136 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 ALAS2P22557 587 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 ELK3P41970 407 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 CARSP49589 748 aaKnown RBP31.86■■■□□ 2.69
CBX4-203ENST00000494546 ITGA8P53708 1063 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 CHAF1BQ13112 559 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 CPZQ66K79 652 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 HIBCHQ6NVY1 386 aaPredicted RBP31.86■■■□□ 2.69
CBX4-203ENST00000494546 SMPDL3AQ92484 453 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 DLG3Q92796 817 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 CERS2Q96G23 380 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 PPANQ9NQ55 473 aaKnown RBP31.86■■■□□ 2.69
CBX4-203ENST00000494546 RNF14Q9UBS8 474 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 NDOR1Q9UHB4 597 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 TRMT6Q9UJA5 497 aaKnown RBP31.86■■■□□ 2.69
CBX4-203ENST00000494546 TP53TG5Q9Y2B4 290 aa31.86■■■□□ 2.69
CBX4-203ENST00000494546 SMAPO00193 183 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 CTSVO60911 334 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 ERGP11308 486 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 NR1D1P20393 614 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 MCM3P25205 808 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 CMPK1P30085 196 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 RPA3P35244 121 aaPredicted RBP31.85■■■□□ 2.69
CBX4-203ENST00000494546 ARHGAP19Q14CB8 494 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 TTLL10Q6ZVT0 673 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 PIWIL4Q7Z3Z4 852 aaKnown RBP31.85■■■□□ 2.69
CBX4-203ENST00000494546 ASB11Q8WXH4 323 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 SNF8Q96H20 258 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 KRT12Q99456 494 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 TRIM4Q9C037 500 aa31.85■■■□□ 2.69
CBX4-203ENST00000494546 ZC3H7BQ9UGR2 993 aaKnown RBP31.85■■■□□ 2.69
CBX4-203ENST00000494546 TLN1Q9Y490 2541 aaKnown RBP31.85■■■□□ 2.69
CBX4-203ENST00000494546 GCN1Q92616 2671 aaKnown RBP31.84■■■□□ 2.69
CBX4-203ENST00000494546 NRP2O60462 931 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 PNLIPRP1P54315 467 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 ARSFP54793 590 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 YBX1P67809 324 aaKnown RBP31.84■■■□□ 2.69
CBX4-203ENST00000494546 HIF1AQ16665 826 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 NKAIN1Q4KMZ8 207 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 TCTE1Q5JU00 501 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 CYHR1Q6ZMK1 362 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 ING2Q9H160 280 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 ACSS2Q9NR19 701 aa31.84■■■□□ 2.69
CBX4-203ENST00000494546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP31.84■■■□□ 2.69
CBX4-203ENST00000494546 A0A0J9YVX5 310 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 EFCAB8A8MWE9 144 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 K7EM74 188 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 ZBTB14O43829 449 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 SEC31AO94979 1220 aaKnown RBP31.83■■■□□ 2.69
CBX4-203ENST00000494546 SLC16A8O95907 504 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 GABRB3P28472 473 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 HSD17B2P37059 387 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 ARL4CP56559 192 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 VSX2P58304 361 aaPredicted RBP31.83■■■□□ 2.69
CBX4-203ENST00000494546 GRM7Q14831 915 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 UGT3A1Q6NUS8 523 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 CNTN4Q8IWV2 1026 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 TTC29Q8NA56 475 aaPredicted RBP31.83■■■□□ 2.69
CBX4-203ENST00000494546 PPFIBP2Q8ND30 876 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 DPH7Q9BTV6 452 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 PLAC1Q9HBJ0 212 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 MRPS30Q9NP92 439 aaKnown RBP31.83■■■□□ 2.69
CBX4-203ENST00000494546 ABCF3Q9NUQ8 709 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 SLC17A6Q9P2U8 582 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 PTRH2Q9Y3E5 179 aaKnown RBP31.83■■■□□ 2.69
CBX4-203ENST00000494546 KLK4Q9Y5K2 254 aa31.83■■■□□ 2.69
CBX4-203ENST00000494546 ZNF839A8K0R7 811 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 GFYI3L273 518 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 KLF7O75840 302 aaPredicted RBP31.82■■■□□ 2.68
CBX4-203ENST00000494546 OTX2P32243 289 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 GCGRP47871 477 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 CCL11P51671 97 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 TCTN3Q6NUS6 607 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 UBE2R2Q712K3 238 aaPredicted RBP31.82■■■□□ 2.68
CBX4-203ENST00000494546 C17orf53Q8N3J3 647 aaPredicted RBP31.82■■■□□ 2.68
CBX4-203ENST00000494546 FBXO15Q8NCQ5 510 aaPredicted RBP31.82■■■□□ 2.68
CBX4-203ENST00000494546 ZNF480Q8WV37 535 aa31.82■■■□□ 2.68
CBX4-203ENST00000494546 WDR83Q9BRX9 315 aaKnown RBP31.82■■■□□ 2.68
CBX4-203ENST00000494546 SLC6A20Q9NP91 592 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms