RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 BNIPLQ7Z465 357 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 TAF8Q7Z7C8 310 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 NLRP14Q86W24 1093 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 GKN2Q86XP6 184 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 ADGRG5Q8IZF4 528 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 PYROXD2Q8N2H3 581 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 FSTL5Q8N475 847 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-219ENST00000494323 ARL10Q8N8L6 244 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 CCL4L1Q8NHW4 92 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 SLC30A5Q8TAD4 765 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 RXFP2Q8WXD0 754 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 ARHGEF26Q96DR7 871 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 HMCESQ96FZ2 354 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 EDEM3Q9BZQ6 932 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 DPEP2Q9H4A9 486 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 SUDS3Q9H7L9 328 aaPredicted RBP5.14□□□□□ -1.59
PTCD3-219ENST00000494323 RDH14Q9HBH5 336 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 MRPL40Q9NQ50 206 aaKnown RBP5.14□□□□□ -1.59
PTCD3-219ENST00000494323 FOXJ2Q9P0K8 574 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 SEPT10Q9P0V9 454 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 LRIT1Q9P2V4 623 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 DKK2Q9UBU2 259 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 KLQ9UEF7 1012 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 MOSPD1Q9UJG1 213 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 RNF215Q9Y6U7 377 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 SCN8AQ9UQD0 1980 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 SDK2Q58EX2 2172 aa5.14□□□□□ -1.59
PTCD3-219ENST00000494323 LRRK2Q5S007 2527 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM202A6NGA9 273 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM110-MUSTN1A8MSY1 372 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 PES1O00541 588 aaKnown RBP5.13□□□□□ -1.59
PTCD3-219ENST00000494323 PIP5K1BO14986 540 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 B4GAT1O43505 415 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TRIAP1O43715 76 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 RRP9O43818 475 aaKnown RBP5.13□□□□□ -1.59
PTCD3-219ENST00000494323 RAMP2O60895 175 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TMCC1O94876 653 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 INMTO95050 263 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 PIGNO95427 931 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 PCCBP05166 539 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 LIPCP11150 499 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CD53P19397 219 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 ZFP36P26651 326 aaKnown RBP5.13□□□□□ -1.59
PTCD3-219ENST00000494323 MST1P26927 711 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CCKBRP32239 447 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CDH5P33151 784 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-219ENST00000494323 PEX5P50542 639 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 GEMIN4P57678 1058 aaKnown RBP5.13□□□□□ -1.59
PTCD3-219ENST00000494323 OR1D5P58170 312 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 RHOAP61586 193 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 MC2RQ01718 297 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 EIF3IQ13347 325 aaKnown RBP5.13□□□□□ -1.59
PTCD3-219ENST00000494323 FOXE3Q13461 319 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TUBA3CQ13748 450 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 NFATC4Q14934 902 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CYTH1Q15438 398 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 MAPKAPK3Q16644 382 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 UGP2Q16851 508 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM52BQ4KMG9 183 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TMTC4Q5T4D3 741 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 MANEALQ5VSG8 457 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 NKAIN2Q5VXU1 208 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 NAA35Q5VZE5 725 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 SFRP4Q6FHJ7 346 aaPredicted RBP5.13□□□□□ -1.59
PTCD3-219ENST00000494323 SCYL2Q6P3W7 929 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TUBA3EQ6PEY2 450 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 KCTD20Q7Z5Y7 419 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 ZSCAN30Q86W11 494 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CAMK1DQ8IU85 385 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 LURAP1LQ8IV03 231 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CCDC28AQ8IWP9 274 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CCDC185Q8N715 623 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 DENND6BQ8NEG7 585 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 JOSD2Q8TAC2 188 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 HTR3CQ8WXA8 447 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 OR1E3Q8WZA6 343 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM125Q96AQ2 219 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 NACC2Q96BF6 587 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 EID2BQ96D98 161 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 ZNF503Q96F45 646 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 GDAP1L1Q96MZ0 367 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 SORCS2Q96PQ0 1159 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 OSBPL9Q96SU4 736 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CMKLR1Q99788 373 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 SEMA3CQ99985 751 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 C1QTNF7Q9BXJ2 289 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 SLC25A18Q9H1K4 315 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 SPATS2LQ9NUQ6 558 aaKnown RBP5.13□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM248Q9NWD8 314 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 ZNF69Q9UC07 566 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 RWDD2AQ9UIY3 292 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 CACNA1DQ01668 2161 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 ICE1Q9Y2F5 2266 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 ANKRD36A6QL64 1941 aa5.13□□□□□ -1.59
PTCD3-219ENST00000494323 UTP20O75691 2785 aaKnown RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 SPTBN1Q01082 2364 aaKnown RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 TRGV11A0A075B6L2 103 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 GTPBP10A4D1E9 387 aaKnown RBP5.12□□□□□ -1.59
PTCD3-219ENST00000494323 B4DGG1 531 aa5.12□□□□□ -1.59
PTCD3-219ENST00000494323 J3KR12 359 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms